Pairwise Alignments

Query, 324 a.a., TRAP transporter solute receptor, unknown substrate 5 from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 337 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 77.0 bits (188), Expect = 6e-19
 Identities = 76/318 (23%), Positives = 138/318 (43%), Gaps = 14/318 (4%)

Query: 3   RRLFSLSVAAATMAM--SLPALAQTKWDLPAAYPATNFHTVNLTA--FANDVDKATGGKL 58
           R+ F  +VAAA++    + PA AQ         PA N    +  A  F + V+KAT G L
Sbjct: 5   RKHFLAAVAAASLLAFGAGPAFAQKVLKYTHYQPAGNDQPKHAAALAFKDHVEKATNGSL 64

Query: 59  KITVHAGASLFKAPEIKRAVQGGQAQIGEILLAAYQNEWQMFGADGLPFLATSYADSMKL 118
           K+ ++    L  A ++   ++ G  ++  +        ++ F   GLPFL   +A +  +
Sbjct: 65  KVELYPAGQLGPAQQVMEGLRLGTVELAVVHDGGIPGVYKTFNIFGLPFLFNDHAHAYAV 124

Query: 119 Y--KAQKPILEKKLAEQGMTLLYTVAWPPQGI----YSKKPVASAADLKGSKWRAY-SPA 171
              K  + + E      G+ L+    +   GI     +K+ + +  D+KG K R   SP 
Sbjct: 125 LDGKFGQELAEDMRKRTGIRLM---GYADNGIRHFTNNKRAIKTPEDMKGLKIRVQPSPV 181

Query: 172 TSRIAELVGAQPVTVQAAELSQALATGVVESNMTSGATGVDSKLYEHLKYYYDVQAWLPK 231
             ++ E +GA P  +   EL  ALA G  +         + + L++H K+          
Sbjct: 182 FVKLVESLGASPTAIDWGELPAALAQGTADGQENGVTNIMAASLFQHQKHITLDGHVYSL 241

Query: 232 NAIIMNKRAFDALDKPTQDAVLKAGAEAEARGWAASQKVNTDTLAILKANGMAVEAPSAA 291
           +A ++++R F+ L+   + AV +    A+      ++  +     +L   GM V   + A
Sbjct: 242 HAYMVSERFFNGLNATEKKAVTEGVDIAKKIHRDMTRAQDLSAKKVLTEKGMTVTELTPA 301

Query: 292 LKADMQKVGETMVKEWLE 309
                +KV +  V+ +LE
Sbjct: 302 EIDRFRKVAQPPVRAYLE 319