Pairwise Alignments

Query, 381 a.a., Heat shock (predicted periplasmic) protein YciM, precursor from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 389 a.a., lipopolysaccharide assembly protein LapB from Dickeya dadantii 3937

 Score =  157 bits (396), Expect = 6e-43
 Identities = 106/372 (28%), Positives = 174/372 (46%), Gaps = 12/372 (3%)

Query: 12  LPLAFALGWVASRFDLRQWRM-EGRQAPKAYFRGLNHLLNEQQDQAIDAFIEAVQGDPDT 70
           LP+A A GW   R   +Q +  E  +  + Y  G+N LL+ QQD+A++ F++ ++ D +T
Sbjct: 9   LPVAAAYGWYMGRRSAQQDKQDETNRLSREYVTGVNFLLSNQQDKAVELFLDMLKDDSNT 68

Query: 71  AELHFALGNLFRRRGDYDRAVRVHEHLLSRADISRKDRDRAQHALALDFLKAGLLDRAET 130
            E H  LGNLFR RG+ DRA+R+H+ L   A +S + R  A   L  D++ AGL DRAE 
Sbjct: 69  FEAHLTLGNLFRSRGEVDRAIRIHQALTESASLSFEQRLLAVQQLGRDYMVAGLYDRAEE 128

Query: 131 ALHKL-QGSDFEGEALLALLGIYERSRDWPQAKRIAQRLEDAEQGSFATRLAHYLCEEAE 189
              +L    DF   AL  LL I++ + DWP A   A++L    +    + +AH+ CE++ 
Sbjct: 129 IFKQLVDEEDFRVSALQQLLQIHQSTSDWPNAIDTAEKLVKLGKTQLRSEIAHFYCEQSL 188

Query: 190 LAQRGGDSATALQRLNEAVQRAPQLARGWMALSALKTQAGDASGAFDALLRMNQH----A 245
            A    D   A+  L +A     Q AR  + L  +     + + A   L ++ Q      
Sbjct: 189 QAMGSDDLDKAMTMLKKASAADNQCARVSIMLGRIYMAQQNYAQAVAVLEQVLQQDMELV 248

Query: 246 PQSLPLAARALADLARQTGREADALKLLQASHDRAPAIDVTEALASLSSGTEAVRSRYLS 305
            ++LP+       L +     A   + ++        + + + L    S TE+ ++    
Sbjct: 249 SETLPMLQECYRHLQQPENWAAFLRRCVEEKSGSTADLMMADVLEQYES-TESAQTYVTR 307

Query: 306 HLEREPSL-----VITTEWMAGETLSNPTAQASVQKALEHASAPLRRYRCAACGFEARQH 360
            L+R P++     +I       E      +   ++  +        RYRC  CGF ++  
Sbjct: 308 QLQRYPTMRVFHRLIDYHLREAEDGRAKESLLVLRNMVGEQIQAKPRYRCHKCGFTSQSL 367

Query: 361 FWQCPGCQAWDS 372
           +W CP C+ W S
Sbjct: 368 YWHCPSCRTWAS 379