Pairwise Alignments

Query, 563 a.a., Succinate dehydrogenase/fumarate reductase, flavoprotein subunit from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 562 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  563 bits (1450), Expect = e-165
 Identities = 296/554 (53%), Positives = 365/554 (65%), Gaps = 4/554 (0%)

Query: 4   LHCDLLIIGSGASGLSAAVTAAHSGLKVVLVEKEPVFGGATSWSGGWMWVPGNPLARRAG 63
           L CD+L+IGSGASGL+AAVTAAH GL VV+ EK    GG ++WSGGW+W+P NPLA   G
Sbjct: 4   LECDVLVIGSGASGLAAAVTAAHHGLTVVVAEKASQLGGTSAWSGGWLWIPRNPLAIAEG 63

Query: 64  IHEDPEQPRTYLKNELGDRYVASQVNAFLDQCGPMVAFFEAHTELQFVDGNAIPDIHGHV 123
           I E  + P  YL+ +   R +  +  AFL     MVAFFE HT +QF  G+ +PD+    
Sbjct: 64  IVEADDAPERYLRAQTHTRELDPRQRAFLRHGPEMVAFFEQHTAVQFQCGSRMPDMR-EG 122

Query: 124 PGAATQGHQVAAAPYDGRRVGPLIRRLRTTMRETAFMGMPIMAGPDLGAFLSMTRSFKSL 183
            G+A  G  + A PYDGRR+GP + +LR  +   +  GM I  G D+ AF + TRS K+ 
Sbjct: 123 DGSARGGRSLCALPYDGRRLGPWLHKLRPPLDIVSLAGMGIAGGADMAAFFNATRSPKAA 182

Query: 184 VHVARRVGRHLLDLWVHGRAMQLVNGVALVARLAKSAEQAGVQLIESAPARRLLIENGVV 243
           +HV +R+ RH  DL +H R + LVNG ALVARL +SA   GV L+    A RLL+    V
Sbjct: 183 LHVGKRLLRHGRDLLLHRRGLHLVNGNALVARLLRSALDRGVTLLTEKAASRLLLCEERV 242

Query: 244 CGAVVVQAGGEIEIRATKGVVLATGGFPNDMQRRKALFPRSPTDQEHLALPPRSCSGDGI 303
            GA+   A G+  I A +GVVLA GGFP+D QR   L P +P   +H +  PR  SGDG+
Sbjct: 243 NGALF--ADGQA-IYARRGVVLACGGFPHDRQRISQLMPHAPDGDQHYSAAPRENSGDGL 299

Query: 304 SLGESAGGRLVTDLASPVAWAPVSRVQHPDGSVGHFPHIIDRAKPGLIGVLADGKRFVNE 363
            LGE AGGR+    A   AWAPVS+V   +G  GHFPH+IDRAKPG I V  DG+RFVNE
Sbjct: 300 RLGEQAGGRVSAAGAHGGAWAPVSQVPRRNGHFGHFPHLIDRAKPGFIAVRRDGRRFVNE 359

Query: 364 ADGYCDYTAAMVAAVPPGQEVASWLICDHRFQRRYGIGFAKPFPLPLTRHLRSGYLTRGA 423
           AD Y D+  A+ AA P  ++  +WLICDH  QRRYGIG+AKPFP P   + RSGYL  GA
Sbjct: 360 ADCYHDFMNALFAATPQAEQPEAWLICDHAAQRRYGIGWAKPFPFPTRFYQRSGYLHSGA 419

Query: 424 SIEALANACGISPEGLMETVSVFNTHARQGKDPAFGRGSTPYNRKQGDPLHAPNPCVAPI 483
           ++  LA  CGI  E L  TV  FN HA QG+DP F RG++ YNR QGDP   PNP + P+
Sbjct: 420 TLAQLAQRCGIDAEQLQRTVEGFNHHAAQGEDPTFLRGASAYNRAQGDPQQVPNPSLRPL 479

Query: 484 EHAPFYAVKVLPGSFATFAGLKTNASAQVLGRDDQPIPGLYAVGTDMASIMGGVYPSGGI 543
              PF+AVK+LPGS  TFAGL T+ASA+VL    QPIPGL+AVG DM S+MGG YPSGGI
Sbjct: 480 LKGPFHAVKLLPGSLGTFAGLDTDASARVLDHAGQPIPGLFAVGNDMHSVMGGYYPSGGI 539

Query: 544 NLGPAMTFGYIAAR 557
            LGP MTFGY+A R
Sbjct: 540 TLGPGMTFGYLAGR 553