Pairwise Alignments

Query, 563 a.a., Succinate dehydrogenase/fumarate reductase, flavoprotein subunit from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 471 a.a., TcuA: flavoprotein used to oxidize tricarballylate to cis-aconitate from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 67.0 bits (162), Expect = 2e-15
 Identities = 98/371 (26%), Positives = 157/371 (42%), Gaps = 59/371 (15%)

Query: 209 GVALVARLAKSAEQAGVQLIESAPARRLLIENGVVCGAVVVQAGGEIEIRATKGVVLATG 268
           G ALV    +SAE  GV++    P  R+ +++G    A+  ++G  I  R+    VLA G
Sbjct: 129 GKALVNAYYRSAENLGVRVRYETPVDRIEVQDGRFVAALT-RSGERITARSC---VLAAG 184

Query: 269 GFPNDMQRRKALFPRS-----PTDQEHLALPPRSCSGDGISLG---ESAGGRLVTDLASP 320
           GF +D    +  + ++     P D     L   +    G+ L    +  G   + D    
Sbjct: 185 GFESDRDWLREAWGQNERGEWPADN---FLIRGTAYNKGVLLKHLLDDHGADRIGDPTQA 241

Query: 321 VAWAPVSRVQHPDGSVGHFPHIIDRAKPGLIGVLADGKRFVNEADGYCDYTAAM---VAA 377
              A  +R    DG +      ID    G++ V ++ +RF +E + +     A+   + A
Sbjct: 242 HMVAIDARAPLYDGGICTR---IDCVSLGVV-VNSEARRFYDEGEDFWPKRYAIWGRLVA 297

Query: 378 VPPGQEVASWLICDHRFQRRYGIGFAKPFPLPLTRHLRSGYLTRGASIEALANACGISPE 437
             P Q    + I D +      IG   P   P  +           ++  LA   G+  +
Sbjct: 298 QQPKQ--IGYSIIDSK-----AIGRFMPPVFPGVK---------ADTLPDLARQLGLDVD 341

Query: 438 GLMETVSVFNTHARQGK------DPAFGRGSTPYNRKQGDPLHAPNPCVAPIEHAPFYAV 491
             M+T+  +N   R G+      D     G TP          A      PI+ APFY  
Sbjct: 342 TFMQTLDQYNAACRVGRFDHTALDDCHTEGVTP----------AKTHWARPIDTAPFYGY 391

Query: 492 KVLPGSFATFAGLKTNASAQVLGRDDQPIPGLYAVGTDMA-SIMGGVYPSG-GINLGPAM 549
            + PG   T+ GL+T+ +A V   +DQP P L+  G  MA +++G  Y +G G+++G A 
Sbjct: 392 ALRPGITFTYLGLRTDDTAAV-RFNDQPSPNLFVAGEMMAGNVLGKGYTAGVGMSIGTA- 449

Query: 550 TFGYIAARHAA 560
            FG IA  +AA
Sbjct: 450 -FGRIAGTNAA 459



 Score = 33.1 bits (74), Expect = 2e-05
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%)

Query: 7  DLLIIGSGASGLSAAVTAAHSGLKVVLVEKEPVFGGATSWSGG 49
          D+L+IG G + L AA+ A  +G  V+L+E  P       W GG
Sbjct: 5  DVLVIGGGNAALCAALMAREAGASVLLLEAAP-----REWRGG 42