Pairwise Alignments

Query, 563 a.a., Succinate dehydrogenase/fumarate reductase, flavoprotein subunit from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 467 a.a., TcuA: flavoprotein used to oxidize tricarballylate to cis-aconitate from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 63.2 bits (152), Expect = 2e-14
 Identities = 100/370 (27%), Positives = 143/370 (38%), Gaps = 59/370 (15%)

Query: 209 GVALVARLAKSAEQAGVQLIESAPARRLLIENGVVCGAVVVQAGGEIEIRAT-KGVVLAT 267
           G ALV    +SAE+ GVQ+  + P   L + +G    A+   AG E   R T K  VLA 
Sbjct: 127 GKALVNAYYRSAERLGVQVRYNTPVHALELHDGEFVAAL---AGSE---RITAKACVLAA 180

Query: 268 GGFPNDMQRRKALFPRS-----PTDQEHLALPPRSCSGDGISLGESAGGRLVTDLASPVA 322
           GGF ++ +  +  +  +     P D   L    R   G  +     AG  ++ D +    
Sbjct: 181 GGFESNREWLREAWGENARGEWPADN-FLIRGTRFNQGVLLKFMMDAGADIIGDPSQSHC 239

Query: 323 WAPVSRVQHPDGSVGHFPHIIDRAKPGLIGVLADGKRFVNEADGYCDYTAAM---VAAVP 379
            A  +R    DG +      +D    G++ V  D +RF +E + +     A+   + A  
Sbjct: 240 VAIDARAPLYDGGICTR---VDCVSLGIV-VNRDAERFYDEGEDFWPKRYAIWGRLVAQQ 295

Query: 380 PGQEVASWLICDHRFQRRYGIGFAKPFPLPLTRHLRSGYLTRGASIEALAN-AC--GISP 436
           PGQ    + I D +      IG   P   P            GA    LA  AC  G+  
Sbjct: 296 PGQ--IGYSIIDSK-----AIGHFMPPVFP------------GAQANTLAELACQLGLDA 336

Query: 437 EGLMETVSVFNTHARQGK------DPAFGRGSTPYNRKQGDPLHAPNPCVAPIEHAPFYA 490
           E    TV+ +N   + G       D    +  TP       PL AP          P+Y 
Sbjct: 337 EKFTHTVTQYNQACQPGHFDHTLLDDCATKNLTPAKTHWARPLDAP----------PYYG 386

Query: 491 VKVLPGSFATFAGLKTNASAQVLGRDDQPIPGLYAVGTDMASIMGGVYPSGGINLGPAMT 550
             + PG   T+ GLK N  A V      P   L+  G  MA  + G   + G+ +    T
Sbjct: 387 YALRPGITFTYLGLKVNERAAV-HFAGHPSRNLFVAGEMMAGNVLGKGYTAGVGMSIGTT 445

Query: 551 FGYIAARHAA 560
           FG IA   AA
Sbjct: 446 FGRIAGIEAA 455



 Score = 35.4 bits (80), Expect = 5e-06
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 5/43 (11%)

Query: 7  DLLIIGSGASGLSAAVTAAHSGLKVVLVEKEPVFGGATSWSGG 49
          D+L+IG G + L AA+TA  +G  V+L+E  P       W GG
Sbjct: 3  DVLVIGGGNAALCAALTAREAGASVLLLEAAP-----REWRGG 40