Pairwise Alignments

Query, 235 a.a., DNA polymerase III epsilon subunit (EC 2.7.7.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 246 a.a., DNA polymerase III, epsilon subunit, Proteobacterial from Enterobacter asburiae PDN3

 Score =  212 bits (540), Expect = 5e-60
 Identities = 116/238 (48%), Positives = 159/238 (66%), Gaps = 11/238 (4%)

Query: 2   RQIVLDTETTGLSA----ENGDRIIEIGCVELLNRKLTGNNLHFYLNPERDSHEDALKVH 57
           RQIVLDTETTG++       G +IIEIG VE++NR+LTGNN H YL P+R    +A  VH
Sbjct: 10  RQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDPEAFGVH 69

Query: 58  GISNEFLRDKPKFAAISDQLLDYLRDAEVIIHNAPFDISFLNKEMERLGHP-PITTILGQ 116
           GI++EFL DKP FA ++D+ L+Y++ AE++IHNA FDI F++ E  +L    P T    +
Sbjct: 70  GIADEFLLDKPTFADVADEFLEYIKGAELVIHNASFDIGFMDYEFSKLNRDIPKTNTFCK 129

Query: 117 VTDSLVMAKEMFPGKRNGLDALCDRLGVDNSGRTLHGALLDAELLADVYINMTRGQDALI 176
           VTDSL +A++MFPGKRN LDALC R  +DN+ RTLHGALLDA++LADVY+ MT GQ ++ 
Sbjct: 130 VTDSLALARKMFPGKRNSLDALCSRYEIDNTKRTLHGALLDAQILADVYLTMTGGQTSMK 189

Query: 177 MDIGD----APGEDGQTEALDLSRFELPVLLANEQEAQAHEGVLAELDKASKGKTLWR 230
             + +      GE G  + +      L V+LA+++E   HE  L +L +   G  +WR
Sbjct: 190 FSMENESQQTQGEAG-IQRIVRQASRLRVVLASDEELLNHESRL-DLVQKKGGSCMWR 245