Pairwise Alignments

Query, 473 a.a., RND efflux system, outer membrane lipoprotein, NodT family from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 515 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  133 bits (335), Expect = 1e-35
 Identities = 124/477 (25%), Positives = 203/477 (42%), Gaps = 43/477 (9%)

Query: 8   AAVLSACSVTKPPASVPVDLPATWYAPPLAHQGSTEQLTT---WWGRFDDPVLTNWVARA 64
           A +LSAC++        V  PA +       Q +         WW  + D  L + V R 
Sbjct: 50  ALLLSACAIGPDYQRPEVVEPAQFKEAQGWRQATPSDSLARGAWWELYGDRQLNDLVMRL 109

Query: 65  QAQSPSVASARAQVFAARAARLGVEAQAGPQLN---AVANASRGLTDPTMPLGTS----- 116
              + +VA A A+   A+A          P ++       AS+G       L +S     
Sbjct: 110 NTANQTVAQAEARFRQAQALARSSRGAFYPTVDLSVGKTRASQGTGSSNASLSSSSSGIR 169

Query: 117 --LNAGLQASWAIDLWGGNDARRG--SAEAQQDAAGAGWHQARVLVASELAQLYFAQRLC 172
             LNA L  SW  D+WG    RRG  + EA  +A+ A     R+   SEL Q Y   R+ 
Sbjct: 170 DTLNAQLGVSWEADIWG--KLRRGLEANEASAEASSADLAAMRLSQQSELVQSYLQLRVM 227

Query: 173 REQLAVAARDRDSRGVTAENNAISERAGLTAPAVAALARASGAEGAARYRQQNETCERQV 232
            EQ  +     ++   + +      RAG++     A A+       A          +  
Sbjct: 228 DEQTRLLQATLETYQRSLQMTENQYRAGVSGKDAVAQAQTQLKTTQASLIDLIWQRAQLE 287

Query: 233 KSLTALTGVPEPEVRQRLAAAPDLQALLQSPRMDQLLSVNAVPAEVIRQRPDVYRAQREL 292
            ++  L G  E      LA + D+ AL Q P         ++P++++ +RPD+  A+R +
Sbjct: 288 NAIAVLIG--EAPANFNLAVSKDIPALPQIPV--------SLPSQLLERRPDIASAERSV 337

Query: 293 VAASEDVGVARAALLPSLSLSGSVLRNRFSGGGNEGTF--------NTWSAGPLTLSLPL 344
           +AA+ ++GVA+AA  P LSLS        +GG +  T+          WS GP  L++ L
Sbjct: 338 IAANANIGVAKAAYYPDLSLS-------LAGGYSSSTYADWISLPNRFWSVGP-KLAMTL 389

Query: 345 LGRDALRANTDSAQARYEAAAIAYAGSLRQAVAEVEQALVSISSLRERVASTDTAVAGYG 404
                  A  D   A Y+     Y  ++     EVE  +V +  L +    ++ A+    
Sbjct: 390 FDGGQRSAEVDRTVASYDETVAKYRQTVLDGFREVENYMVQLKVLEDEAVVSNEALEAAR 449

Query: 405 QSFQATEARYRVGLASLNELEEARRLKLAADSSAVALQQERINAWIQLYVALGGGFD 461
           +S + T+ +Y+ GL +  ++   +   L+ + + + L Q R+ A +QL  ALGGG+D
Sbjct: 450 ESLRLTQNQYKAGLIAYLDVVTVQATALSNERTVLTLLQTRLVASVQLIAALGGGWD 506