Pairwise Alignments

Query, 473 a.a., RND efflux system, outer membrane lipoprotein, NodT family from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 511 a.a., Outer membrane component of tripartite multidrug resistance system from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  130 bits (327), Expect = 1e-34
 Identities = 123/428 (28%), Positives = 195/428 (45%), Gaps = 20/428 (4%)

Query: 46  TTWWGRFDDPVLTNWVARAQAQSPSVASARAQVFAARAARLGVEAQAG-PQLNAVANASR 104
           ++WW  F+D VL +  ARAQA + ++  A  ++  +RA +LG+ +    P + A A  SR
Sbjct: 63  SSWWTLFNDDVLADLQARAQAGNLNLQIASERIEQSRA-QLGIASSLLLPSVGASAGYSR 121

Query: 105 GLTDPT---MPLGTSLNA------GLQASWAIDLWGGNDARRGSAEAQQDAAGAGWHQAR 155
                      LG   +A      G  ASW +DLWG     R  A A  +A       AR
Sbjct: 122 EALSEHGKFAALGAPTSASDFWQLGFDASWELDLWGRARRSREGAAAAFEATVYEREAAR 181

Query: 156 VLVASELAQLYFAQRLCREQLAVAARDRDSRGVTAENNAISERAGLTAPAVAALARASGA 215
           V +++E+A+ Y   R  + QL +  ++ +    T       ER G+      A ARA  A
Sbjct: 182 VALSAEVARTYLQLRGTQAQLDITRQNLEVADRTLRLAESRERNGVATRFETASARAQLA 241

Query: 216 EGAARYRQQNETCERQVKSLTALTGVPEPEVRQRLAAAPDLQALLQSPRMDQLLSVNAVP 275
              A   +  +     + +L  L G     +  +L  A  L +L  +  +        +P
Sbjct: 242 TVEALVPELVQRRNTLMNALALLQGEEPRALDAQLLEAMPLPSLPSNVPV-------GLP 294

Query: 276 AEVIRQRPDVYRAQRELVAASEDVGVARAALLPSLSLSGSVLRNRFSGGGNEGTFNTW-S 334
           +E+  +RPD+ RA+ +L AA+  +GVA+A   P + L G V    F     +   + + S
Sbjct: 295 SELAHRRPDIQRAEAQLHAATAAIGVAKADFYPRIGLRGRVGVEAFEFNDLDSWDSRFFS 354

Query: 335 AGPLTLSLPLLGRDALRANTDSAQARYEAAAIAYAGSLRQAVAEVEQALVSISSLRERVA 394
            GP T+ LP+     L+      +AR   AAIAY  ++ QA  EV+ AL + ++ + R A
Sbjct: 355 VGP-TVYLPIFQGGRLKQRLALNEARQRTAAIAYRQTVLQAWHEVDNALDAWAAQQHRHA 413

Query: 395 STDTAVAGYGQSFQATEARYRVGLASLNELEEARRLKLAADSSAVALQQERINAWIQLYV 454
               +     Q+  A E  Y+ G A    +  A+R  LA+ +S  A         + LY 
Sbjct: 414 ELLVSYEQNKQALHAAERGYQEGAADYLNVLAAQRGVLASQTSLNASATNAALTLVNLYK 473

Query: 455 ALGGGFDP 462
           +LGGG+DP
Sbjct: 474 SLGGGWDP 481



 Score = 25.4 bits (54), Expect = 0.005
 Identities = 50/219 (22%), Positives = 85/219 (38%), Gaps = 33/219 (15%)

Query: 5   AASAAVLSACSVTKPPASVPVDLPATWYAPPLAHQGSTEQLTTWWGRFDDPVLTNWVARA 64
           A  A +L A  +   P++VPV LP+      LAH+               P +    A+ 
Sbjct: 271 ALDAQLLEAMPLPSLPSNVPVGLPS-----ELAHR--------------RPDIQRAEAQL 311

Query: 65  QAQSPSVASARAQVF--AARAARLGVEAQAGPQLNAVANASRGLTDPTMPLGTSLNAGLQ 122
            A + ++  A+A  +       R+GVEA     L++  +    +  PT+ L       L+
Sbjct: 312 HAATAAIGVAKADFYPRIGLRGRVGVEAFEFNDLDSWDSRFFSV-GPTVYLPIFQGGRLK 370

Query: 123 ASWAIDLWGGNDAR-RGSAEAQQDAAGAGWHQARVLVASELAQLYFAQRLC-----REQL 176
              A+     N+AR R +A A +      WH+    + +  AQ +    L       +Q 
Sbjct: 371 QRLAL-----NEARQRTAAIAYRQTVLQAWHEVDNALDAWAAQQHRHAELLVSYEQNKQA 425

Query: 177 AVAARDRDSRGVTAENNAISERAGLTAPAVAALARASGA 215
             AA      G     N ++ + G+ A   +  A A+ A
Sbjct: 426 LHAAERGYQEGAADYLNVLAAQRGVLASQTSLNASATNA 464