Pairwise Alignments

Query, 708 a.a., Cyclic di-GMP binding protein precursor from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 766 a.a., Cyclic di-GMP binding protein precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  387 bits (994), Expect = e-111
 Identities = 246/710 (34%), Positives = 376/710 (52%), Gaps = 43/710 (6%)

Query: 8   LRGDAGEHRVHLGVRLDEMVVRARLNLAITPSPALLPGLSHLQVRLNDRLLSVIPLRSDK 67
           LRG      +  G+R DE+  +A LNL  TPSP+LLP  S L+V LND L+ V+P+  ++
Sbjct: 76  LRGVNPNGGIEFGMRSDEVASKAVLNLEYTPSPSLLPVQSQLKVYLNDELMGVLPVTKEQ 135

Query: 68  PGERIVRTLELDPRLFVDDNWLSLRLVGHYTLECEDPLHSSLWAEVDVDASGFELGVRPL 127
            G++ +  + ++P    D N + L  VGHY   CE+P  S+LW ++  + S  +L    L
Sbjct: 136 LGKKTLAQVPINPLFITDFNRVRLEFVGHYRDVCENPASSTLWLDIGRN-SALDLTYNML 194

Query: 128 ALEDELALFPAPWFDRRGAGRVEVPMVLGAQPGKDRLGTASIMASWLGSLAGERGAVFPL 187
           A+ ++L+ FP P+FD R    V +P+V    P   +   ASI+ASW GS AG RG  FP+
Sbjct: 195 AVNNDLSHFPVPFFDPRDNRPVTLPIVFADMPDLAQQQAASIVASWFGSRAGWRGQRFPV 254

Query: 188 RRERLPDRHAIVLASPQQPGPEGLELPEAQGPTVRLMRHPKLPHVKLLVLQGRNDQELRT 247
               LPDR+AIV A+  +      + P    P + +M HP  P+VKLLV+ GR+D++L  
Sbjct: 255 LYNHLPDRNAIVFATNDRRPDFLRDHPAVNAPVIEMMSHPDNPYVKLLVVFGRDDKDLLQ 314

Query: 248 AALGLILGRQAMSGNVAQIHELAPIPLRQAYDAPNWVATDKPVRLGELVPQRAALQLDGT 307
           AA G+  G     G+   ++++ P+  R+ YDAPNWV TD+PV  GEL      LQ  G 
Sbjct: 315 AAKGIAQGNILFRGSSVVVNDVKPLLARKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGL 374

Query: 308 HPASVLVRWRTPPDLWQGPGRAALLNLRYRSSVPSPADNALMSLSLNDSFVRAWRLASAP 367
            PA + V    PPDL+        ++L YR + P   D++ + +SLN+ F++A+ L    
Sbjct: 375 EPAPINVSLNLPPDLYLLRSNGIDMDLNYRYTSPPTKDSSRLDISLNNQFLQAFSL---- 430

Query: 368 SGESLGGLGRWLGNADEVSDTVRVKLPEFQPRQTNTLDVRMP---LG-----------MK 413
                        N+ + ++ + ++LP  Q       DV +P   LG           M 
Sbjct: 431 -------------NSTQETNRLLLRLPVLQGLLDGKTDVSIPALKLGAMNQLRFDFRYMN 477

Query: 414 PQAG----DC-AWRAEPTRASVDAESTLDFSALPHFLEMPDLAAFAEAGFPFTRYADLSQ 468
           P  G    +C  ++  P    +  +ST+DFS   HF+ MPDL AFA AGFPF+R ADLS 
Sbjct: 478 PMPGGSVDNCITFQPVPNHVVIGDDSTIDFSKYYHFIAMPDLRAFANAGFPFSRMADLSD 537

Query: 469 TAVVLPSQPDDHEIETLLAVMGSFGRWTGMPAWHFEITAPEHLERFPDRDLLLLGGPQLH 528
           T  V+P  P + ++ETLL  +G+ G  TG PA +  IT         D DLL++    + 
Sbjct: 538 TLAVMPKTPTEAQMETLLNTVGAIGGQTGFPAINLTITDDSAQIADKDADLLIISA--IP 595

Query: 529 ALLKRWQKDPMLALEAQRRDTRGPMAAVAGWRSWLRPATDAERPTRSPLRMEAPGTLATI 588
             LK  ++  +L ++A +   + PM   A + S +    +A+R   +   + A G +A +
Sbjct: 596 GKLKDDKRIDLL-VQATQSWVKTPMRQTA-FPSIM--PDEADRAADAQSTVTASGPMAAV 651

Query: 589 TGFESPLRAGRSVVALSSDQTQGLRWLSEALIESALAAHIQGGLTVVQERDVRSYESTSV 648
            GF+SP    RSV+AL +D  +G + L++A+ +S   A + G + V++E  V S     +
Sbjct: 652 VGFQSPFNDQRSVIALLADSPRGYQLLNDAVNDSGKRAAMFGSVAVIRESGVHSLRVGDI 711

Query: 649 YHVGQLPWTARLSLFLSTYPWFAAAALASALGLLVWAARIRLKLYAARRL 698
           Y+VG LPW  RL   L+ +P   A   A ++ LL W     L++ + RRL
Sbjct: 712 YYVGHLPWFERLWYALANHPVLLAVLAALSVVLLAWVLWRLLRILSRRRL 761