Pairwise Alignments

Query, 377 a.a., Probable Co/Zn/Cd efflux system membrane fusion protein from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 368 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  122 bits (307), Expect = 1e-32
 Identities = 91/321 (28%), Positives = 162/321 (50%), Gaps = 32/321 (9%)

Query: 72  GTLRSRQSVTLKPETSGRVARIVFADGARVKAGQLLVQLDDTLQRAELSQAQAQLSIARA 131
           GT+     + ++P+ SG + +I   DG  V  GQ L ++D +  +A   QAQA L  A+A
Sbjct: 55  GTVVPLNEIEIRPQVSGYINKIFVEDGQEVAKGQKLYEIDRSKYQAAYEQAQATLKSAKA 114

Query: 132 NLKRNQELVA-------QNFVAQRVVEESQANLQVAEAQVALADARLQRMR-------IT 177
           NL+R ++ +A       Q  +A++ ++ ++A++  AE+QV+ A+A+++          IT
Sbjct: 115 NLERVKKDLARYEALDKQEAIAKQQLDYAKADILTAESQVSSAEAQVRSTLTDYNYSVIT 174

Query: 178 APFAGTVGLRSINLGAYVKDGDSLVN-LEDTSMLTVDFRLPER--------YQSQLAPGQ 228
           APF+GTVG+  + LGA V  G SL+N L     + VDF + ER         +++  P  
Sbjct: 175 APFSGTVGISQVRLGAQVSAGQSLLNTLSSNDPVLVDFVVNERDVRRFSKMMKNESLPDS 234

Query: 229 VVQVQLDALPNRPFEAKVLAVDPLLDANGRSISVRAVMPPAADNVLRPGMFARVLIVFSV 288
              +Q           ++  +D  +     +I++R V  P  D  L PGM   + ++   
Sbjct: 235 TFTIQFGENDVYRHHGELTTIDRAVGRQSGTINMR-VEFPNPDRELIPGMTLNLRVLNQD 293

Query: 289 NERALVVPEEALVPQAGKQYAYVLDEQGEGDAKKRLSRRVEVALGARRGSEVEVVSGLQQ 348
               + +P +A+  Q G+ + YV+ +         +  +  V LG + G+E+ V  GL+ 
Sbjct: 294 IGDQIAIPFKAVTEQMGEYFVYVVGDDS-------VVHQQNVQLGTKVGAEIVVREGLKP 346

Query: 349 GDAVVIAGQQRLQRDGTAVRV 369
           G  +V+ G Q+L R+G  V++
Sbjct: 347 GQKIVVEGIQKL-REGAKVQI 366