Pairwise Alignments

Query, 280 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 319 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score = 46.6 bits (109), Expect = 7e-10
 Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 3/154 (1%)

Query: 5   EFPDVVQSLQALQSGAAHVLSGPYANTIAQQARGQNLQSFVLQGRAPQVVVGVSLETMGH 64
           EFP   Q L+AL  G+  + S      I  QA G +L    ++   P+  V +  E    
Sbjct: 62  EFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPI 121

Query: 65  NGGVSDLRGRRVGVMATSAASHRVASLVLSKVGLRANDVRYVPLANAAAAVQAFRRGELD 124
              V+DL+G +V     S+ SH +    L + GL+  D++   L  A A   AF++G +D
Sbjct: 122 KT-VADLKGHKVAFQKGSS-SHNLLLRALRQAGLKFTDIQPTYLTPADARA-AFQQGNVD 178

Query: 125 AISTTDPTVTQLEQMGSLKVVADTRSVRGTAEVF 158
           A +  DP  +     G ++V+ D   +  T   +
Sbjct: 179 AWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFY 212