Pairwise Alignments

Query, 518 a.a., Inner membrane component of tripartite multidrug resistance system from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 513 a.a., putative Multidrug efflux MFS transporter from Pseudomonas putida KT2440

 Score =  397 bits (1020), Expect = e-115
 Identities = 211/495 (42%), Positives = 304/495 (61%), Gaps = 9/495 (1%)

Query: 5   AAPPAPAAAV--APPKRAIAGLVGILIAAMMAGLNNRVGALALADVRGALGFGLDDASWL 62
           AA PAPAA    A   + + GL G+L+A + AGLN  V  ++LAD+RGA+G G D+ +WL
Sbjct: 12  AAAPAPAAPAQTAFGLQVVVGLFGVLLAVLCAGLNESVTKISLADIRGAMGIGADEGAWL 71

Query: 63  TTVYSAGEVIAMPFAAWFAITLSVRRFELWMIGACTLLAVCIPFIHDLDLLLAMRFLQGI 122
             VYSA  V AM FA W A T S+RRF +  +G   +L +  PF  +L  L+ +R LQG 
Sbjct: 72  LAVYSAASVSAMAFAPWLATTFSLRRFTMSAVGLFAVLGLLQPFAPNLHSLMLLRVLQGF 131

Query: 123 ASGTMIPVLMMAALKFLPPHIRLHGLALYALTATFAPNLSIWLAGQWTDGLFDWRWVYWQ 182
           A+G + P+LM  AL+FLPP I+++GLA YALTATF PNL   LAG WT+ +  W+W +WQ
Sbjct: 132 AAGALPPMLMSVALRFLPPGIKVYGLACYALTATFGPNLGTPLAGLWTEYV-GWQWAFWQ 190

Query: 183 ILPLAAIAALLIGWGLPKDPIQTDRFPQANWPGMAFGMPAFALITVALDQGVRLDWFNSP 242
           I+  + +A + +GWGLP+DP++ +RF Q +W G+  G+PA +   + L  G R  WF+SP
Sbjct: 191 IILPSLLAMVCVGWGLPQDPLRLERFKQFDWRGVLLGLPAISCTVLGLSLGDRWGWFDSP 250

Query: 243 LIVVSLVAGLTLLAAYLLTEWYHPAPFIKLQMLSRRNLALGFTLFICLLVVLTSGVMLPM 302
           LI   L  GL LL  ++  EW  P PF +L++L RRNL+        +LVVL+    +P 
Sbjct: 251 LICWLLGGGLLLLVLFMYNEWSEPLPFFQLRLLQRRNLSFALVTLAGVLVVLSGVGSIPS 310

Query: 303 TYLGPLQSYRPLQMAPIGLIVALPQLVLGSVVALFLYRKWVDARFVFAGGLLLIALACFF 362
            YL  +Q YRP Q +P+ ++VA+PQL+   + A     + VD R+V   GL ++A++C  
Sbjct: 311 AYLAQIQGYRPAQTSPLMMLVAMPQLIALPLTAALCNIRAVDCRWVLGIGLAMLAVSCVG 370

Query: 363 GAQLTSDWNRDQFVMTQTLQAFGQPMAVVSMLFLCTSVVHPSEGPYVSGNINTLRALGSV 422
            + LTS+W R  F     LQ FGQPMAV+ +L L T+ + P EGP+ S   NT++ L +V
Sbjct: 371 SSLLTSEWIRGDFYPFYLLQVFGQPMAVLPLLMLSTNGMTPQEGPFASSWFNTVKGLAAV 430

Query: 423 LGGAVVGQLVTVRQRFHAEMLLDHAALVGNSVPLAPEPAQLMGIIGQQALVLSVADAYRV 482
           + G ++  L T+R+ FH+  L+D    +GN+  +    A L   I  QA VL+ AD Y V
Sbjct: 431 IAGGLLDVLGTLRRHFHSNHLVDS---LGNAPLVDGNAAGLAKRIHDQAQVLTSADLYLV 487

Query: 483 LGVLA---LVMVPFV 494
           L  +A   + ++PFV
Sbjct: 488 LACIAVALICLIPFV 502