Pairwise Alignments
Query, 531 a.a., Sensory box histidine kinase from Hydrogenophaga sp. GW460-11-11-14-LB1
Subject, 1264 a.a., Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) from Hydrogenophaga sp. GW460-11-11-14-LB1
Score = 353 bits (907), Expect = e-101
Identities = 182/512 (35%), Positives = 291/512 (56%), Gaps = 9/512 (1%)
Query: 15 RAIADRFPGQMAYFDLDLRCHFGNQAFCDSQGLRPSELEGRPFQDCFAQDALPALLPRFM 74
+ I D PG MAY D L F N G+ P + GR +C A + + PR
Sbjct: 735 QTITDHVPGLMAYLDAGLHFRFANAEHLRVYGMDPQYIIGRHIGECVAPEIWADIEPRMR 794
Query: 75 QAVGGEKQVLVSEQHIPGSHAVRLETAFVPDFRD-GVVHGVFLEARDITEHRH------- 126
A+ G+ + + + + +++PDF D G V G+F++ DIT+ +
Sbjct: 795 TALAGQPHHFETWRPTIDGQQIYVSASYLPDFNDEGTVQGLFVQIIDITDRKRIEERVIH 854
Query: 127 -DPALEEHVNRRTHELRQAKRRFDLMVDALQDSCIYFLDPTGLITEWSESAHRLHGFSRE 185
+ LE+ ++ R+ EL ++++RF LMVD L+D CI+F+D G+IT+W++SA R+ G+S
Sbjct: 855 LNEELEQRISERSLELLESEQRFRLMVDNLRDYCIFFMDAEGIITDWTDSAQRMDGYSPT 914
Query: 186 QVGHLHLADLTAPRVGEEEEIGIHDTIRLAIDRGQWETRGWLKRAGGEAFWGQTLITALR 245
Q+ H L P + ++ +RLA RGQ E W R G +W +++ ALR
Sbjct: 915 QMLGRHYGVLFDPANPDHGKVSAMQMLRLAASRGQHELHNWHTRKDGSQYWSHSVLIALR 974
Query: 246 GENDELEGLSCITRDMTAAKDLDRVMNDLNAELDRRVTQRVRQYTVPNKDLDIFTHHITH 305
++ EL+G + I RDMT AK LD +M ++N EL+ RV +R Q NKDL+ F++ ++H
Sbjct: 975 DDSGELKGFAKINRDMTDAKRLDDLMRNINDELENRVVERTEQLLAANKDLESFSYSVSH 1034
Query: 306 DLRGPMRHINTFAGLIAEALGEDASDEIRHFRDAMKRASQRLNAMIENLLTYSRIGRIDL 365
DLR P+RHI++F L+ E LG + + + + +++ ++ +I+ LL +SR+GR +
Sbjct: 1035 DLRSPLRHISSFVSLLEEHLGGNCDEVSARYLSTIGNSARHMSQLIDGLLAFSRLGRSAV 1094
Query: 366 HPGQLEMKSVLEGVVSRLRQSEPHRDIQWVIQDDLPAVVADAAMVADLFTRLLDNAMKFT 425
+ ++ +++ VV+++ R + WV+ DLP V DA ++ +++ LL NA K+T
Sbjct: 1095 NLTAVDFTLLVDAVVNQIGHDTEGRVVDWVVAPDLPVVQGDALLLREVWANLLGNAYKYT 1154
Query: 426 RPCEQAEIQIGCRAESDGSCLFFIVDNGVGFDVAKAHNLFLMFQRQHHSLDFEGYGAGLA 485
RP E+ I++G + FF+ DNGVGFD A LF +FQR H + +FEG G GLA
Sbjct: 1155 RPRERTRIEVGWSMDPVVGYTFFVRDNGVGFDTKYAQKLFGVFQRLHRASEFEGTGIGLA 1214
Query: 486 LCQRIVQRHNGRIWLDSTPGHGCAVYFTLPVE 517
L +RI++RH G IW +S G G YF+LP E
Sbjct: 1215 LTRRIIERHGGTIWAESQLGEGSVFYFSLPFE 1246
Score = 62.8 bits (151), Expect = 8e-14
Identities = 64/276 (23%), Positives = 118/276 (42%), Gaps = 15/276 (5%)
Query: 15 RAIADRFPGQMAYFDLDLRCHFGNQAFCDSQGLRPSELEGRPFQDCFAQDALPALLPRFM 74
+AI + P Q+A++D D+ C F N ++ +L G A
Sbjct: 477 QAITNSVPVQLAFYDRDMICRFANASYARWVQGDTRQLVGMHLSQIARPQDFEASRLHLA 536
Query: 75 QAVGGEKQVLVSEQHIPGSHAVRLETAFVPDFRDGVVHGVFLEARDITEHRHDPALEEHV 134
A+ GE Q E+ P H+ + P ++ G V G+ ++ D+++ + A E+ V
Sbjct: 537 AALSGEIQRFEGERAFPDGHSFYAGIEYTPYWQAGQVQGIIIQMIDLSQRK---ASEDQV 593
Query: 135 NRRTHELRQAKRRF-DLMVDALQDSCIYF-LDPTGLITEWSESAHRLHGFSREQ-VGHLH 191
+ +L A R+ DL +A C Y LD G+ +++ G+ RE+ VG +
Sbjct: 594 RQANGQLNSALRQSQDLYNNA---PCGYHSLDVNGIYVSINDTELDWLGYRREEVVGKMA 650
Query: 192 LADLTAPRVGEEEEIGIHDTIR-LAIDRGQWETRGWLKRAGGEAFWGQTLITALRGENDE 250
D+ APR + E + ++ A++ ++E ++R G F +A+R N +
Sbjct: 651 FRDMMAPRHSDLLERRMQKILKDDALEAVEYE----MRRRDGSTFHALLSSSAVRDANGQ 706
Query: 251 LEGLSCITRDMTAAKDLDRVMNDLNAELDRRVTQRV 286
+ D+T K + + D N + +T V
Sbjct: 707 FLRSNTTVVDITRRKAAEMALRD-NQRFLQTITDHV 741
Score = 31.2 bits (69), Expect = 2e-04
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 232 GEAFWGQTLITALRGENDELEGLSCITRDMTAAKDLDRVMNDLNAELDRRVTQR 285
G W T++T + + L ++RD+TA + NAEL+ RV QR
Sbjct: 278 GTPKWWDTVVTPICDAQNRPVMLLAVSRDITALHRQQEEIQHFNAELEDRVRQR 331
Score = 29.6 bits (65), Expect = 7e-04
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 118 ARDITE-HRH-------DPALEEHVNRRTHELRQAKRRF-----DLMVDALQDSCIYF-L 163
+RDIT HR + LE+ V +RT EL +AK R D Q C Y +
Sbjct: 304 SRDITALHRQQEEIQHFNAELEDRVRQRTDELAEAKERIHQALRDAQALYNQAPCGYHSV 363
Query: 164 DPTGLITEWSESAHRLHGFS-REQVGHLHLADLTAP 198
D G+ +++A G+ E VG L D+ AP
Sbjct: 364 DAEGVFVLINQTALDWLGYEHHEIVGKLRFHDIVAP 399