Pairwise Alignments

Query, 531 a.a., Sensory box histidine kinase from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 607 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  136 bits (342), Expect = 3e-36
 Identities = 86/296 (29%), Positives = 137/296 (46%), Gaps = 12/296 (4%)

Query: 220 QWETRGWLKRAGGEAFWGQTLITALRGENDELEGLSCITRDMTAAKDLDRVMNDLNAELD 279
           +WE     +R  GE +W Q  I  ++     +     +  D+T  K     + +L  EL 
Sbjct: 322 KWEGELINRRKSGELYWEQATIQPIQNIEGVITNYLAVKSDITEQKKAAAKLAELVEELR 381

Query: 280 RRVTQRVRQYTVPNKDLDIFTHHITHDLRGPMRHINTFAGLIAEALGEDASDEIRHFRDA 339
           R            N++L+ F +  +HDLR P+R I+ +  L+ + L      + R F   
Sbjct: 382 RS-----------NEELEQFAYVASHDLRQPLRMISAYLALLEKKLSASFDQDARDFFGF 430

Query: 340 MKRASQRLNAMIENLLTYSRIGRIDLHPGQLEMKSVLEGVVSRLRQSEPHRDIQWVIQDD 399
               ++RL+ MI +LL YSRIGRI      + +  V+   +  L  +      + V+ D 
Sbjct: 431 AIDGARRLDRMIVDLLEYSRIGRITAPMEPVSLGEVVSNALRYLEVAVAESGSEVVVPDG 490

Query: 400 LPAVVADAAMVADLFTRLLDNAMKFTRPCEQAEIQIGCRAESDGSCLFFIVDNGVGFDVA 459
           LP +  D   +  LF  L+ NA+K+     Q  I++ CRA+     +  + DNG+G    
Sbjct: 491 LPTISGDGGELVRLFQNLIANAIKYMPEGRQPRIEVLCRAQG-AEWVVGVKDNGIGIPPD 549

Query: 460 KAHNLFLMFQRQHHSLDFEGYGAGLALCQRIVQRHNGRIWLDSTPGHGCAVYFTLP 515
               +F +FQR      FEG G GLA+C++I + H GRIW++S  G G       P
Sbjct: 550 DLKRVFGIFQRLVAREQFEGTGIGLAVCRKIAEHHGGRIWVESEMGVGSTFLVAFP 605