Pairwise Alignments

Query, 531 a.a., Sensory box histidine kinase from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 593 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  127 bits (320), Expect = 9e-34
 Identities = 116/457 (25%), Positives = 202/457 (44%), Gaps = 37/457 (8%)

Query: 75  QAVGGEKQVLVSEQHIPGSHAVRLETAFVPDFR-------------DGVVHGVFLEARDI 121
           + +G E ++L+ +++I      R   A  P  R             DG V  V +    +
Sbjct: 157 ELIGSELEILIPDKYISKHKQNRKSYAKQPKPRSMGQGMELFGKRKDGSVFPVEISLSPL 216

Query: 122 TEHRHDPALEEHVNRRTHELRQAKRRFDLMVDALQDSCIYFLDPTGLITEWSESAHRLHG 181
                D        R   + ++A+ +F  ++++  D+ I   D  G I   +E    + G
Sbjct: 217 KTE--DGLFVSAAIRNITDRKKAENKFKGLLESAPDAII-LADKDGNIQLANEQVVNIFG 273

Query: 182 FSREQVGHLHLADLTAPRVGEEEEIGIHDTIRLAIDRGQ---WETRGWLKRAGGEAFWGQ 238
           +S+ ++    +  L   R          +    A  R      E  G   R  GE F  +
Sbjct: 274 YSKSELIGNKIEMLVPMRYHHRHTNHRDEFFHTAETRPMASGLELSG--VRKSGEEFPVE 331

Query: 239 TLITALRGENDELEGLSCITRDMTAAKDLDRVMNDLNAELDRRVTQRVRQYTVPNKDLDI 298
             ++ L  E+  L     + RD +    + + M D N +L            V NK+L+ 
Sbjct: 332 ISLSPLETEDGALA--IAVIRDTSEKAAVKKEMQDFNKKLQ-----------VKNKELEQ 378

Query: 299 FTHHITHDLRGPMRHINTFAGLIAEALGEDASDEIRHFRDAMKRASQRLNAMIENLLTYS 358
           F +  +HDL+ P++ + +F   ++E  GE   +  +     +  A+ R+  +I+ LL YS
Sbjct: 379 FAYVASHDLQEPLQTVMSFTEFLSENYGEHFDETGKKSMQYIMEATGRMRQLIKGLLDYS 438

Query: 359 RIGRIDLHPGQLEMKSVLEGVVSRLRQSEPHRDIQWVIQDDLPAVVADAAMVADLFTRLL 418
           RIGR +  P  ++  S++  +   L  S+       +  D+LP +  +   +  LF  L+
Sbjct: 439 RIGR-ERKPVMVDCNSLISDIKVDL-SSQIKATNASIHADNLPHIKGNYTELRLLFQNLI 496

Query: 419 DNAMKFTRPCEQAEIQIGCRAESDGSCLFFIVDNGVGFDVAKAHNLFLMFQRQHHSLDFE 478
            N +KF +     +IQIG   ++D   LF I DNG+G +      +F++FQR H    ++
Sbjct: 497 TNGIKFHQEGVPPKIQIGVTKKAD-HWLFCIKDNGIGIENKFKERIFIIFQRLHTRNTYD 555

Query: 479 GYGAGLALCQRIVQRHNGRIWLDSTPGHGCAVYFTLP 515
           G G GLA CQ+IV+ H G+IW+ S  G G +  FT+P
Sbjct: 556 GTGIGLAHCQKIVELHGGKIWVHSELGKGSSFLFTVP 592