Pairwise Alignments

Query, 1053 a.a., Probable transmembrane drug efflux protein from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 1021 a.a., ACR family transporter from Pseudomonas simiae WCS417

 Score =  841 bits (2173), Expect = 0.0
 Identities = 451/1033 (43%), Positives = 641/1033 (62%), Gaps = 25/1033 (2%)

Query: 20   FNLSQWALDHQAFTRYLMIVLMVLGVVGYFQLGQDEDPPFTFRAMVVRAYWPGATAEQVA 79
            FNLS WAL HQ+F  YLM V +++GV  Y  LG++EDP FT + MV++  WPGAT E+  
Sbjct: 5    FNLSDWALKHQSFVWYLMFVALLMGVFSYMNLGREEDPSFTIKTMVIQTRWPGATQEETL 64

Query: 80   EQVADRIEKTLQEVPYADKIRSYSKPGETLIIFQLKDSSPPQEVQQIWYTARKKVGDMRG 139
            +QV DRIEK L+E+   D ++SY++PGE+ +   LKD++  + + +IWY  RKK+ D+RG
Sbjct: 65   KQVTDRIEKKLEELDALDYVKSYTRPGESTVFVFLKDTTSAKAIPEIWYQVRKKIDDIRG 124

Query: 140  TLPQGVVGPFFNDEFGDVYGVIYALQGEGFSPADKKQVADDVRQRLLRVKDVRKVELFGV 199
            T PQG+ GP FNDEFGDV+G +YA  G+G S    +   + VR  +  V  + KVE+ G 
Sbjct: 125  TFPQGLQGPSFNDEFGDVFGSVYAFTGDGLSMRQLRDYVEQVRAEIRSVPGLGKVEMIGQ 184

Query: 200  QDEKLYIEISQKRLATLGLNLQQVLDALGQQNAVESAGSVQTPQDVVQVRVAGAFNSVEQ 259
            QDE +Y+  S ++LA LG++ +QV+ +L  QNAV  AG ++   + + VR +G F S + 
Sbjct: 185  QDEVIYLNFSTRKLAALGIDQRQVVQSLQSQNAVTPAGVIEAGPERISVRTSGQFASEKD 244

Query: 260  LRAMPIRAANGTQIRLGDIAKIGLGYVDPPQVLVRHEGKDSIALGISMAKGGDIIALGKA 319
            L  + +R  N    RL DIA I  GYVDP + + R  GK +I L I+M KGG+I + GKA
Sbjct: 245  LANVNLR-LNDRFYRLADIADISRGYVDPARPMFRFNGKPAIGLAIAMQKGGNIQSFGKA 303

Query: 320  LKTTVAGIEATLPAGMTLAQVQDQPSAVTNSVNEFVKVLIEAVVIVLAVSFLALGLHRRP 379
            L   +  + A LP G+ + +V DQ   V  +V  F   L EAV+IVL VSF++LG     
Sbjct: 304  LHERMDELTADLPVGVGVHKVSDQAEVVEEAVGGFTSALFEAVIIVLVVSFISLG----- 358

Query: 380  GGRGLKRYVLDMRPGLVVFITIPLVLAITFLAMHYWGIGLHKISLGSLIIALGLLVDDAI 439
                       MR GLVV  +IPLVLA+ F+ M Y GI + ++SLG+LIIALGLLVDDA+
Sbjct: 359  -----------MRAGLVVACSIPLVLALVFVFMEYSGITMQRVSLGALIIALGLLVDDAM 407

Query: 440  IAVEMMVRKLEEGYDMMRAATFTWDATAMPMLTGTLITAAGFLPIGLANSTTGEYTFAIF 499
            I VEMM+ +LE+G    +AAT+ + +TA PMLTGTL+T AGF+PIGL  S+ GEYTF +F
Sbjct: 408  ITVEMMITRLEKGETKEQAATYAYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYTFTLF 467

Query: 500  AVTVLALVISWVVAVLFVPYLGVVLLKVKPHAEGEPHEVFDGPFYVRFRAVVDWCVQHRW 559
            AV  +A+++SWVVAVLF P +GV +L     A  +PH    G     F   + W +++RW
Sbjct: 468  AVIAVAMLVSWVVAVLFAPVIGVHILS----ANVKPHNAEPGRIGRAFNGGMLWAMRNRW 523

Query: 560  LTIGATILTFVLGIAGMGSVQQQFFPDSSRPEILVDIWLPEGSSMPAMDEVTRRVENRLA 619
              IG T+  FV  +  M  VQ QFFP S RPE+LVD+ LP+ +S+    +   R+E  + 
Sbjct: 524  WAIGITVALFVASVFSMQFVQNQFFPSSDRPELLVDLNLPQNASINETRKAVDRLEAIIK 583

Query: 620  KEEGVRGVTTWVGSGVPRFYLPLDQIFPQTNVSQMIVLPQDLKTREHLRKALPGLLATEF 679
             +  +   +T++G G  RFYLPLDQ       +Q++++ + L+ R  L   L   L  +F
Sbjct: 584  DDPDIARWSTYIGQGAIRFYLPLDQQLENPYYAQLVIVSKGLEERGELIARLQKRLRDDF 643

Query: 680  PEVRGRVKLLPNGPPVPYPVQFRVVGSDPQVLRGLADEVKLAMRENPNMRGVNDNWNESV 739
              +   V+ L  GPPV  P+Q+RV G D   +R  A E+   + +N ++  +  +WNE  
Sbjct: 644  VGIGSYVQPLEMGPPVGRPIQYRVSGKDTDQVRKHAIELATLLDKNSHLGEIIYDWNEPG 703

Query: 740  KRLRLEVDQAKARALGVSSQSIAQASRTLLSGTTVGQYREGDKLIDIVLRQPLEERDAIT 799
            K LR+++ Q KAR LG+SS+ +AQ   +++SG +V Q  +   LI++V R    ER    
Sbjct: 704  KVLRIDIAQDKARQLGLSSEDVAQLMNSVVSGASVTQVHDDIYLINVVGRAEDAERGTPE 763

Query: 800  SLANAYLPTASGQAIPLLQIARPVFDWEPGVLWRENRDYAITVQGDVVEGLQGATVTAQL 859
            +L N  + T +G +IPLL  A   ++ E  ++WR +R+  IT++  V + +Q   +  QL
Sbjct: 764  TLQNLQIVTPNGTSIPLLAFATVRYELEQPLVWRRDRNPTITIKASVRDEMQPTDLVKQL 823

Query: 860  QPKLKAISDGWASKGLGAYHIEVAGAVEESSKGSASIVVGVPLMLFIVFTLLMLQLQSFS 919
            +P++   S G        Y +   G VEES K    I   VPLMLF++ T LM+QL S  
Sbjct: 824  KPEIDKFSAGLPV----GYKVATGGTVEESGKAQGPIAKVVPLMLFLMATFLMIQLHSVQ 879

Query: 920  RSMLVFLTGPLGMAGVAGALLLLNRPFGFVALLGVIALMGMIQRNSVILIDQIEQDRARG 979
            +  LV    PLG+ GV  AL+    P GFVA+LG++AL+G+I RNSVIL+ QI +    G
Sbjct: 880  KMFLVASVAPLGLIGVVLALIPTGTPMGFVAILGILALIGIIIRNSVILVTQIHEYEVAG 939

Query: 980  VPAWDAIVEAAVRRMRPIVLTAAAAVLAMIPLSRSVFWGPMAVAIMGGLIVATVLTLLAL 1039
               WDA+VEA   R RPI+LTAAAA L MIP++R VFWGPMA A++GG+I+AT+LTLL L
Sbjct: 940  YTPWDAVVEATEHRRRPILLTAAAASLGMIPIAREVFWGPMAYAMIGGIIIATLLTLLFL 999

Query: 1040 PAMYAAWFRVRRP 1052
            PA+Y AW+++R P
Sbjct: 1000 PALYVAWYKIREP 1012