Pairwise Alignments

Query, 498 a.a., 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 478 a.a., 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190) from Variovorax sp. SCN45

 Score =  709 bits (1829), Expect = 0.0
 Identities = 354/463 (76%), Positives = 384/463 (82%), Gaps = 11/463 (2%)

Query: 30  EGWLAVESLDIDAQGIARRPDGKVVFIEGALPFEQVSVNVHRKKNNWEAGTVTAIHRESS 89
           E WL VESLD+DAQG++ + DG VVFIEGALPFE+V  NVHR+KNNWE GTVTAI RESS
Sbjct: 16  EEWLQVESLDLDAQGVSHKADGMVVFIEGALPFEEVQFNVHRRKNNWEQGTVTAIRRESS 75

Query: 90  QRVRPGCPHFGLHAGACGGCKMQHLHEAAQVAVKQRVLEDNLWHLGKVRAETLMRPIEGP 149
           QRVRPGCPHFGLH GACGGCKMQHL  AAQVAVKQR LEDNLWHLGKV+ E L+RP+EGP
Sbjct: 76  QRVRPGCPHFGLHTGACGGCKMQHLDAAAQVAVKQRALEDNLWHLGKVKPENLLRPLEGP 135

Query: 150 AWGYRHRARLSVRHVHKKGEVLIGFHERKSRYVADMQVCPVLPPHVSAMLMPLRELIFGM 209
           AW YR+RARLSVRHV KKG VLIGFHERKSRY+ADMQVCPVLP  VS MLMPLR LI  +
Sbjct: 136 AWHYRYRARLSVRHVVKKGTVLIGFHERKSRYLADMQVCPVLPKQVSEMLMPLRALIGSL 195

Query: 210 DARETCPQIELASGD-------DVTALVLRHLEPLSEDDLARLRAFGARH-GVQWWLQAK 261
           DAR+TCPQIELA GD          ALVLRHLEPLS  D+ RL+AF A + GVQWWLQAK
Sbjct: 196 DARDTCPQIELACGDAPDSTKLGTIALVLRHLEPLSRADIDRLKAFAAENEGVQWWLQAK 255

Query: 262 GPDTVKLLDEGGEVLSYALPEFGITMPFKPTDFTQVNPFINRVLVVRALRLLDARADERV 321
           GPDTVKLL+EGG  LSY LPEFG+TMPFKPTDFTQVNP INR LV +ALRLLD + DERV
Sbjct: 256 GPDTVKLLEEGGSPLSYRLPEFGVTMPFKPTDFTQVNPHINRALVGKALRLLDVQPDERV 315

Query: 322 IDWFCGLGNFTLPIATTAGEVLGIEGSEALVARSRENLAGNQAGRD--RPLAPTTFAARN 379
           IDWFCGLGNFTLP+A+ A EVLGIEGS+ LVAR+  N   NQ      R L+P  F ARN
Sbjct: 316 IDWFCGLGNFTLPLASQAREVLGIEGSDTLVARATANYGTNQPATSARRELSPAKFVARN 375

Query: 380 LFEMTPELLVADGVAQKWLVDPPREGAFALAKAIADLHQNPAL-RGGWTPPQRIVYVSCN 438
           LFEMTP +LV DG A KWLVDPPREGAFALAKA+ADLHQ P L   GWTPP+RIVYVSCN
Sbjct: 376 LFEMTPAMLVEDGSADKWLVDPPREGAFALAKAMADLHQQPELCTDGWTPPKRIVYVSCN 435

Query: 439 PATLARDAGLLVHQAGYRCVTAGVVNMFAHTAHVESMAVFELE 481
           P+TLARDAGLLVHQAGYRC  AGVVNMF HTAHVES+AVFELE
Sbjct: 436 PSTLARDAGLLVHQAGYRCTFAGVVNMFPHTAHVESIAVFELE 478