Pairwise Alignments

Query, 498 a.a., 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 432 a.a., 23S rRNA (uracil-5-)-methyltransferase RumA from Enterobacter asburiae PDN3

 Score =  271 bits (692), Expect = 4e-77
 Identities = 171/456 (37%), Positives = 241/456 (52%), Gaps = 37/456 (8%)

Query: 26  RVLPEGWLAVESLDID--AQGIARRPDGKVVFIEGALPFEQVSVNVHRKKNNWEAGTVTA 83
           RV     + VE+ D+D   QG+AR  +GK +FI G LP E+  + +   K  +  G V  
Sbjct: 10  RVTTRQIITVEATDLDPFGQGVARH-NGKALFITGLLPTERAEITLTEDKRQFARGQVKR 68

Query: 84  IHRESSQRVRPGCPHFGLHAGACGGCKMQHLHEAAQVAVKQRVLEDNLWHLGKVRAETLM 143
              +S +RV+P CP+FG+    CGGC+ QH     Q   K R L   L H        + 
Sbjct: 69  RLNDSPERVKPRCPYFGV----CGGCQQQHASTELQQKSKSRALARQLKH-------DVN 117

Query: 144 RPIEGPAWGYRHRARLSVRHVHKKGEVLIGFHERKSRYVADMQVCPVLPPHVSAMLMPLR 203
             +    WGYR RARLS+ +  K   + +GF +  S  + D+Q CP+L PH+ A+L  +R
Sbjct: 118 EILSDVPWGYRRRARLSLSYQPKTARLEMGFRKAGSSDIVDVQQCPILAPHLEALLPEVR 177

Query: 204 ELIFGMDARETCPQIELASGDDVTALVLRHLEPLSEDDLARLRAFGARHGVQWWLQAKGP 263
             + G+D       +EL   ++   +VLRH  PLS+ D  +L  F   H +  +L    P
Sbjct: 178 TCLSGLDGVRHLGHVELVMANNGPLMVLRHTAPLSKKDREKLERFSHSHDLALFL---AP 234

Query: 264 DTVKLLDEGGEVLSYALPEFGITMPFKPTDFTQVNPFINRVLVVRALRLLDARADERVID 323
            +  L    GE   YA    G+ + F P DF QVN  +N+++V +AL  LD +  +RV+D
Sbjct: 235 QSEILEQVTGEAPWYA--SNGLRLTFSPRDFIQVNDGVNQLMVEKALTWLDVQKSDRVLD 292

Query: 324 WFCGLGNFTLPIATTAGEVLGIEGSEALVARSRENLAGNQAGRDRPLAPTTFAARNLFEM 383
            FCG+GNFTLP+A  A  V+G+EG EALVA+ +EN   N       L   TF  +NL E 
Sbjct: 293 LFCGMGNFTLPLAREAASVVGVEGVEALVAKGQENAQQN------GLQNVTFFHQNLEED 346

Query: 384 TPELLVADGVAQKWLVDPPREGAFALAKAIADLHQNPALRGGWTPPQRIVYVSCNPATLA 443
             +   A     K L+DP R GA  +   I  L            P+R+VYVSCNPATLA
Sbjct: 347 VTQQPWAKQGFDKILLDPARAGAPGVMAHIIKL-----------APKRVVYVSCNPATLA 395

Query: 444 RDAGLLVHQAGYRCVTAGVVNMFAHTAHVESMAVFE 479
           RD+  L+  AGY+     +++MF HT H+ESM +FE
Sbjct: 396 RDSEALI-SAGYQIQRLAMLDMFPHTGHLESMVLFE 430