Pairwise Alignments

Query, 498 a.a., 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 376 a.a., 23S rRNA (uracil-5-)-methyltransferase RumB from Enterobacter asburiae PDN3

 Score = 84.7 bits (208), Expect = 5e-21
 Identities = 102/398 (25%), Positives = 162/398 (40%), Gaps = 57/398 (14%)

Query: 103 AGACGGCKMQHLHEAAQVAVKQRVLEDNLWHLGKVRAETLMRPIEGPAWGYRHRARLSVR 162
           AG C  C+      + Q+  K   L+  L             P+ GP  G+R++A++ V 
Sbjct: 8   AGRCRSCQWIEQPVSQQLTAKMADLQQLL---AAHAVGEWCAPVCGPEQGFRNKAKMVVS 64

Query: 163 HVHKKGEVLIGFHERKSRYVADMQVCPVLPPHVSAMLMPLRELI-------FGMDARETC 215
              +K   L+G   R      D+  CP+ P     +   L+  I       + +  R   
Sbjct: 65  GSVEKP--LLGMLHRDGT-PEDLTDCPLYPASFEPVFAALKPFIARAGLTPYSVARRRGE 121

Query: 216 PQIELASGDDVTALVLRHLEPLSEDDLARLRAFGARHGVQWWLQAKGPDT---------- 265
            +  L +   +   ++      SE  L +LRA         WLQ + P            
Sbjct: 122 LKYLLLTESQLDGGMMLRFVLRSETKLEQLRA------ALPWLQEQLPQLKVITANVQPV 175

Query: 266 -VKLLDEGGEVL---SYALPEF--GITMPFKPTDFTQVNPFINRVLVVRALRLLDARADE 319
            + +++   E+     +AL E   G+ +  +P  F Q NP +   L   A   + A   +
Sbjct: 176 HMAIMEGEKEIFFTDQHALAESFNGVPLWIRPQSFFQTNPTVASSLYATARDWVRALNIQ 235

Query: 320 RVIDWFCGLGNFTLPIATTAGEVLGIEGSEALVARSRENLAGNQAGRDRPLAPTTFAARN 379
            + D FCG+G F L  AT   ++ GIE S   +A ++++ AG        L  T    + 
Sbjct: 236 HMWDLFCGVGGFGLHCATPEMQLTGIEISAEAIACAKQSAAG--------LGLTNLHFQA 287

Query: 380 LFEMTPELLVADGVAQKWLVDPPREGAFALAKAIADLHQNPALRGGWTPPQRIVYVSCNP 439
           L + T        V +  LV+PPR G   + K++ D     A       P+ IVY SCN 
Sbjct: 288 L-DSTQFATGQGNVPELVLVNPPRRG---IGKSLCDYLSQMA-------PEYIVYSSCNA 336

Query: 440 ATLARDAGLLVHQAGYRCVTAGVVNMFAHTAHVESMAV 477
            T+A+D G L    GYR     + +MF HTAH E + +
Sbjct: 337 QTMAKDIGSL---PGYRIERVQLFDMFPHTAHYEVLTL 371