Pairwise Alignments

Query, 498 a.a., 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 416 a.a., RNA methyltransferase from Agrobacterium fabrum C58

 Score =  131 bits (329), Expect = 5e-35
 Identities = 139/463 (30%), Positives = 207/463 (44%), Gaps = 69/463 (14%)

Query: 33  LAVESLDIDAQGIARRPDGKVVFIEGALPFEQVSVNVHRKKNNWEAGTVTAIHRESSQRV 92
           + ++SL     GIA  PDG V ++  ALP E V++   +     + GTV +I   S+ R 
Sbjct: 6   VTIKSLGAQGDGIAHCPDGPV-YVPFALPGETVAIAKVK-----DQGTVMSITEASADRR 59

Query: 93  RPGCPHFGLHA--GACGGCKMQHLHEAAQVAVKQRVLEDNLWHLGKVRAETLMRPIEGPA 150
            P C HFG     G CGGC +QHL +    A K+ ++      +  +R++ L  P++   
Sbjct: 60  DPVCRHFGPEGINGTCGGCSLQHLADQPYHAFKRELV------VSALRSKGLTPPVDDLV 113

Query: 151 W---GYRHRARLSVRHVHKKGEVLIGFHERKSRYVADMQVCPVLPPHVSAMLMPLRELIF 207
               G R RA  + R   K   +L+GF +  S ++  ++ CPV  P + +    +R +  
Sbjct: 114 ICRPGERRRAVFAARKTEKG--LLLGFSQANSHHIVAIEECPVTSPGIVSRFDAIRAIGL 171

Query: 208 GMDARETCPQI---ELASGDDVTALVLRHLEPLSEDDLARLRAFGARHGVQWWLQAKGPD 264
            M A     +I   E  SG D++   ++     S +D  R      R   +  L  +G  
Sbjct: 172 SMVANAEPFRITVLETLSGLDISVEGIK-----SVNDKQR------RTLTETVLAMRGIA 220

Query: 265 TVKLLDEGGEVL---SYALPEFGITMPFKPT--DFTQVNPFINRVLVVRALRLLDARADE 319
            V L    GE+L      + EFG  +P  P    FTQ        +    L L      +
Sbjct: 221 RVSL---SGEILIEPQKPIIEFG-GIPVSPPAGGFTQATKQAEDAMA--ELMLAHVGKSK 274

Query: 320 RVIDWFCGLGNFTLPIATTAGEVLGIEGSEALVARSRENLAGNQAGRDRPLAPTTFAARN 379
           R+ D FCG G F L +A   G V  +E  +  + ++ +  A N  G    L P +   R+
Sbjct: 275 RIADLFCGSGTFALRLARI-GRVHAVEAEDKAL-KALDFAARNTQG----LKPVSVEKRD 328

Query: 380 LFE---MTPELLVADGVAQKWLVDPPREGAFALAKAIADLHQNPALRGGWTPPQRIVYVS 436
           LF    MT EL   D V    + DPPR GA    K +A            +  ++IV VS
Sbjct: 329 LFRRPLMTSELKNYDAV----VFDPPRAGAEVQCKELAR-----------STVKKIVAVS 373

Query: 437 CNPATLARDAGLLVHQAGYRCVTAGVVNMFAHTAHVESMAVFE 479
           CNP TLARD  +L  + GYR      V+ F  + HVE++AV E
Sbjct: 374 CNPLTLARDLAILT-EGGYRVTRVTPVDQFLWSPHVEAVAVLE 415