Pairwise Alignments

Query, 496 a.a., RND efflux system, outer membrane lipoprotein CmeC from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

 Score =  359 bits (922), Expect = e-103
 Identities = 213/477 (44%), Positives = 287/477 (60%), Gaps = 28/477 (5%)

Query: 24  LTLLAAAALSACSFIPKYERPEAPVASQFPGPQPAAAADAKTGADVAWREFIGDAKLREL 83
           L ++ A  L+ CS  P Y+RPEAPVA+++     AA     +   + W+ FI D  LR+L
Sbjct: 9   LPIVLALTLAGCSLTPTYQRPEAPVAAEWGD---AAGHTGHSVEQLDWQAFIVDPVLRQL 65

Query: 84  IALALKNNRDLRVATLNIEQVRAQYQIRRADQFPTIGLAATGNRQ-------PDGNGGIQ 136
           +  AL NNR LR   L+IEQ RAQY+I+RAD+ P +  +A+GNRQ        DG  G+ 
Sbjct: 66  VGTALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQHLPAALSSDGREGVS 125

Query: 137 STYSVGLALSTWEIDFFGRLGALKEAALAQYLASEEARHAAQTSLVAAVASTWLSLQAND 196
           STY VGL+L  +E+D FGR+ +L +AAL QYLA+EE   AA+ +L+A V+  +L+L   +
Sbjct: 126 STYQVGLSLPEYEVDLFGRVKSLSDAALEQYLATEEVGRAARIALIAEVSQAYLALDGAE 185

Query: 197 ELLVLTERTVATREDSLRLSKLRFDNGATSALDLRQAESLTAAAQSALAQQRRLRALDIN 256
               LT +T+A+REDSL L   R   G  +ALD ++A  L   +++ L    R +    N
Sbjct: 186 RRQALTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRAELEVTVRQQRQAYN 245

Query: 257 ALTLLVGQAPPAELLPVPPTLPAPSANANQVVVPTAPVPAATMLREVPAGLPSDLLTRRP 316
           AL LL+G A  A+ +P                 P  P+    +L ++  G PS L+ RRP
Sbjct: 246 ALVLLLGSAEAAKAMPAER--------------PDEPM----VLNDIVPGAPSALIERRP 287

Query: 317 DIRQAEQQLIAANANIGAARAAFFPRISLTASAGTASSSLSGLFKDGSWGFTLAPQALLP 376
           DI  AE +L A NA+IGAARAAFFPRISLT S GTAS+ +SGLF  GS  +   PQ  LP
Sbjct: 288 DILAAEHRLRARNADIGAARAAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLP 347

Query: 377 IFDAGRNRANLDSSNAGRDIAVAQYEKAIQTAFREVADALAGSATLGDQLSAQQLQATAE 436
           +FDAGRNRA L  + A +D AVA YE AIQ AFREVADALA + TL  + +A++  A   
Sbjct: 348 LFDAGRNRAGLSLAEARKDSAVAAYEGAIQVAFREVADALAATDTLRREQAARRALADTS 407

Query: 437 AERFRLAELRYRNGVASFLDVLDAQRSLFATQQALAQTRLAQQQNQVNLYKALGGGW 493
            E   LA+ RY  GV + L  LDAQR+ +  + A  +    +Q   VNL++ALGGGW
Sbjct: 408 RETLTLAKARYEGGVDNHLRYLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGGW 464