Pairwise Alignments

Query, 333 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 318 a.a., sulfonate ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 63.5 bits (153), Expect = 7e-15
 Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 23/235 (9%)

Query: 14  CLSLLAAAALASPLAAHAQLQEITYLLPAPGTLPAFGPWMLAQAKGYYEQEGLKVNFVTA 73
           CL  LA AA   P   +    +  Y  P    L  FG W L QA  +      KV +V +
Sbjct: 17  CLQPLAHAAETDPAEVNL---DYAYYSPVSLVLKHFG-W-LEQALPHS-----KVGWVLS 66

Query: 74  RGGVDVAKQIGAGNAVIGGAIGDTPIIARAQGIPVKAVAVLGAGSLTQLVSHKDEKIESP 133
           +G     + + +G      +   + +++RA G P+K+V V      T LV  KD  ++S 
Sbjct: 67  QGSNRSLEYLNSGGVDFASSASLSAVLSRANGSPIKSVYVYSRAEWTALVVRKDSPLKSV 126

Query: 134 RELKGKTVTVLAYTDTTYYALLGMLSKVGLTKNDVN-IQAAGPAGVWQQFAAKK--ASAM 190
            +LKGK +     TD  Y   L  L K GL K+DV  +    P G   + A +K    A 
Sbjct: 127 TDLKGKKIAATKGTD-PYLFTLRSLQKAGLKKDDVELVHLQHPDG---RTALEKGDVDAW 182

Query: 191 AGV-PDWTVSAMEAGAQVDILPADIYFKSMAQAILASDETIAK-NPQLIQKLVRA 243
           AG+ P    S ++AG+++     D      +  +++  E  AK +PQ I K++ A
Sbjct: 183 AGLDPHMAASEIQAGSRLLYRNKDF----NSYGVVSVTEQFAKAHPQTITKVLGA 233