Pairwise Alignments

Query, 333 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 342 a.a., ABC transporter, periplasmic binding component-related protein from Pseudomonas putida KT2440

 Score = 63.2 bits (152), Expect = 9e-15
 Identities = 95/346 (27%), Positives = 139/346 (40%), Gaps = 35/346 (10%)

Query: 1   MKMTRAFNGTRRACLSLLAAAALASPL--AAHAQLQEITYLLPAPGTLPAFGPWMLAQAK 58
           MK TR      R   SLLAAA L + L  A  A   +   LL +       G +  A A 
Sbjct: 1   MKKTRF--ALARPLRSLLAAALLPTTLTIAPLAIAGDKVVLLTSWYAQAEQGGFYQALAD 58

Query: 59  GYYEQEGLKVNFVTARGGVDV-AKQIGAGNAVIGGAIGDTPIIARA-QGIPVKAVAVLGA 116
           G YE+EGL V+     GG  V   Q+            D  I+    QG+PV AVA    
Sbjct: 59  GLYEKEGLDVSI--RMGGPQVNGMQLLVSKQADFIVNYDLQILKSVEQGLPVVAVAAPFQ 116

Query: 117 GSLTQLVSHKDEKIESPRELKGKTVTVLAYTDTTYYALLGMLSKVGLTKNDV-----NIQ 171
           G    L++H D  +     L GK V V      T++  L    K  L  N       N+Q
Sbjct: 117 GDPQGLMTHAD--VSGLDALGGKPVLVSTSGQQTWWPWLK--GKYQLADNQARPYTFNLQ 172

Query: 172 A--AGPAGVWQQFAAKKASAMAGVPDWTVSAMEAGAQVDI-LPADIYFKSMAQAILASDE 228
              A P    Q +A+ +             A++AG   +  L AD  +      ++   +
Sbjct: 173 PFLADPQTTQQAYASSEL----------FQAIKAGVTPNFFLFADAGYPPYGSTVVTRQD 222

Query: 229 TIAKNPQLIQKLVRATLKGMKDIMADPKAATTAYVAHVPVHKGK----EASIQKAFELFN 284
            IA++P+ +   VRA+++G K  + DP A         P    +      S  K + L  
Sbjct: 223 IIAEHPERVAGFVRASMEGWKRYLDDPSAGNALIKRDNPNMTDELLAWGVSTLKQYRLVT 282

Query: 285 KYVYAAQKVPGTMDEARLAELQKFYVTNGVVPKETPVKELYTNQFV 330
               A Q + GTM ++R    + F V  G++  + P +  YT +FV
Sbjct: 283 GGEAATQGI-GTMTDSRWQATRDFMVEAGLLGPDAPWRNAYTTRFV 327