Pairwise Alignments

Query, 333 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 344 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 81/301 (26%), Positives = 131/301 (43%), Gaps = 33/301 (10%)

Query: 11  RRACLSLLAAAALASPLAAHAQLQEITYLLPAPGTLP-----AFGPWMLAQAKGYYEQEG 65
           RR  L+  +AAA+++  A     Q    L P   TL         P+ LAQ+KGYY+ EG
Sbjct: 3   RRHFLASSSAAAVSALAAPTVWAQASPKLTPVKFTLDFRITGQTSPFFLAQSKGYYKDEG 62

Query: 66  LKVNFVTARGGVDVAKQIGAGNAVIGGAIGDTPIIARAQ----GIP-VKAVAVLGAGSLT 120
           L V+     G V    +I +G   +G  +GD   +   Q    G P V+AV      +  
Sbjct: 63  LDVSIDVGSGSVASITRIASGVYQMG--LGDISSLIEFQAAQTGTPVVQAVYQYYNRAPF 120

Query: 121 QLVSHKDEKIESP-RELKGKTVTVLAYTDTTYYALLGMLSKVGLTKNDVNIQAAGPAGVW 179
            ++  KD  I +  R L+GK +   A   T       M+++    K+D+   +       
Sbjct: 121 AIIGRKDRGITTDFRSLEGKKIAAAAVESTR--RAWPMVARKLRVKSDLFQWST------ 172

Query: 180 QQFAAKKASAMAGVPDWTV----SAMEAGAQVDILPADIYFKSMA------QAILASDET 229
             FA++    + G  D       SA+   A++ +    I   + A       AILAS+  
Sbjct: 173 TDFASRDNVVVRGDVDGATYFHDSAVSLFARMKLDELSILEYTSAGVNLYGNAILASNAM 232

Query: 230 IAKNPQLIQKLVRATLKGMKDIMADPKAATTAYVAHVPVHKGKEASIQKAFELFNKYVYA 289
           I ++P  +   +RAT + +++ MADP AA  A     P+    EA   + + +  +Y+ A
Sbjct: 233 ITQSPAAVAGFLRATNRAIQESMADPVAAIAATKLREPIL--NEAVELERWRITQRYIAA 290

Query: 290 A 290
           A
Sbjct: 291 A 291