Pairwise Alignments

Query, 333 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 320 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 80/321 (24%), Positives = 141/321 (43%), Gaps = 25/321 (7%)

Query: 18  LAAAALASPLAAHAQLQEITYLLPAPGTLPAFGPWMLAQAKGYYEQE----GLK---VNF 70
           L AAAL    +A A+   I ++   P     +   +LA+ KG+ ++E    GLK   + +
Sbjct: 13  LVAAALLWAGSAAAETVNIGFMPFVP-----YSAILLAKQKGWVDEEFTKAGLKDVEIKW 67

Query: 71  VTARGGVDVAKQIGAGNAVIGGAIGDTP-IIARAQGIPVKAVAVLGAGSLTQ-LVSHKDE 128
               GG  V +   +G   I  A+GDTP +IA A GI  + V +   G+  + L+  KD 
Sbjct: 68  HQFAGGPPVNEAFASGALDIA-ALGDTPSLIAFANGIDTRFVGLACKGAKAEALIVLKDS 126

Query: 129 KIESPRELKGKTVTVLAYTDTTYYALLGMLSKVGLTKNDVNIQAAGPAGVWQQFAAKKAS 188
            +++ ++LKGK V  L      +  L+ +L++ GL  +DV     G   +          
Sbjct: 127 SVKTVKDLKGKKVATLR-GGNVHELLVLVLAEAGLKISDVEFLNLGLQDMGIALTKGDVD 185

Query: 189 AMAGVPDWTVSAMEAGAQVDILPADIYFKSMAQAILASDETIAKNPQLIQKLVRATLKGM 248
           A+  V +  ++ +++      L      KS    I+A     AK+P +++  ++A  +G 
Sbjct: 186 AVL-VWEPLLTKLDSEGVSRTLRDGAGLKSNLNPIVALGSFAAKHPDVLKAYLQAVKRGA 244

Query: 249 KDIMADPKAATTAYVAHVPVHKGKEASIQKAFELFNKYVYAAQKVPGTMDEARLAELQKF 308
           + + +DP A +   +A V     K+  +  AF  F       +      D+A LA+  KF
Sbjct: 245 EALRSDP-AGSAQVLAPVVGLTPKQTEL--AFSRFEWKPTVTE-----ADQAELADSVKF 296

Query: 309 YVTNGVVPKETPVKELYTNQF 329
            + N  + +   V       F
Sbjct: 297 LLDNHFIRQTFEVSSFADQAF 317