Pairwise Alignments

Query, 333 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 329 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 75.1 bits (183), Expect = 2e-18
 Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 8/252 (3%)

Query: 18  LAAAALASPLAAHAQLQEITYLLPAPGTLPAFGPWMLAQAKGYYEQEGLKVNFVTARGGV 77
           ++ A + S  A       + +LL    T+  +G       KG+Y+  G+ +     +G  
Sbjct: 18  ISLAGIQSAAAEDKVTLRLNFLLSGVHTIFYYGA-----EKGFYKDAGIDLQIGEGQGSA 72

Query: 78  DVAKQIGAGNAVIGGAIGDTPIIARAQGIPVKAVAVLGAGSLTQLVSHKDEKIESPRELK 137
              + +  G  + G A G + I   ++G PVK+V  L   S   +    D  ++S ++++
Sbjct: 73  RTVQSVATGGDMFGIADGGSVIAGASKGAPVKSVLGLLNTSPYAMTFRADSGVKSIKDVE 132

Query: 138 GKTVTVLAYTDTTYYALLGMLSKVGLTKNDVNI-QAAGPAGVWQQFAAKKASAMAGVPDW 196
           GKTV   A  + +   L  +  K G+  + VNI    GP  +      + A  + G+ + 
Sbjct: 133 GKTVAASA-GEASLALLPALWKKNGVDASKVNILNVDGPGKIIAIMQDRAAGILGGLENQ 191

Query: 197 TVSAMEAGAQVDILP-ADIYFKSMAQAILASDETIAKNPQLIQKLVRATLKGMKDIMADP 255
            V     G + ++   A++   +    I+ + + I  N  L+++ V A+LK ++   ADP
Sbjct: 192 VVVLNSKGLKQNVFSFAELGVNTQGLTIITNTKLIDSNQDLVKRFVAASLKSIEAAKADP 251

Query: 256 KAATTAYVAHVP 267
            AA  A V   P
Sbjct: 252 DAAVAAAVKEKP 263