Pairwise Alignments

Query, 1095 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 848 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  179 bits (453), Expect = 1e-48
 Identities = 98/247 (39%), Positives = 144/247 (58%), Gaps = 6/247 (2%)

Query: 848  RVAAQEQVKALNASLEQRVSARTAELERSMRDMEAISYSIAHDLRAPLRSVNGFASIVLE 907
            R+    +++ LN +LE RV  RTA+L+    ++++ +YS++HDL++PLR+++GF  ++ E
Sbjct: 592  RLRRDREIQRLNETLEHRVRERTADLQMLNAELDSFAYSVSHDLKSPLRAIDGFTRLLDE 651

Query: 908  DEADRLSPTGRDMFERIARSSRNMGQMITDMLELLRVVRVDLEPVPVDMHALAQSVVEAL 967
            +   RLS   R + ER+  S++ MG +I D+L L RV +  L    VD+ A+ Q ++   
Sbjct: 652  EVGPRLSADERQLLERVLHSTQRMGSLIDDLLALARVSQGVLTQQTVDLSAMVQEILAQE 711

Query: 968  SSQASQARIDIQAMP--PAMGDATLLRQVFSNLIDNGLKYSRHLAQPELAVGF----DSR 1021
              +     I+ +  P   A  D  L R V  NL+ N LKYSR      +  G        
Sbjct: 712  QHKQPGRAIESRVTPDLQARCDPRLARIVLENLLANALKYSRTKEHTVIEWGLLPPVGGE 771

Query: 1022 QRAYFVRDNGMGFDMAHAEKLFGLFQRLHAGSNVPGMGVGLAIVSRIVERHGGRVWAESA 1081
             R ++VRDNG+GFDMA+A+KLF  FQRLH  S   G G+GLA V RI+ERHGG +  E  
Sbjct: 772  PRMFYVRDNGVGFDMAYADKLFKPFQRLHMPSEFEGTGIGLATVRRIIERHGGHIIGEGQ 831

Query: 1082 PGEGATF 1088
            PG GA F
Sbjct: 832  PGAGARF 838



 Score = 61.6 bits (148), Expect = 2e-13
 Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 4/126 (3%)

Query: 27  FEALFMASPLAATVSRLSDGRLLAVNDAWLALTGLRREDVIGRTTVELGHWSSAEERARF 86
           F   F  SPL  T+SRLSDG ++ VN A     GL  E++ G+T++E+G W + ++R  F
Sbjct: 326 FAKAFHFSPLNMTISRLSDGAIIEVNRAQDRAQGLLPEEIRGKTSMEIGAWLTPQDREAF 385

Query: 87  VSQSPSTETVQ----HLRLRDGQMHRVRLHFTVIELSLEPLALVYMTEATREFEATEALR 142
           V Q      +      +R +DG +   R+   ++++  EP  L      T E E    L 
Sbjct: 386 VEQLLRQGHIDGYETRMRHKDGSLVDTRIWAELLDIDGEPCILACTVSITAEKEREALLL 445

Query: 143 EANLGL 148
               G+
Sbjct: 446 NVARGV 451



 Score = 31.2 bits (69), Expect = 3e-04
 Identities = 65/285 (22%), Positives = 107/285 (37%), Gaps = 39/285 (13%)

Query: 27  FEALFMASPLAATVSRLSDGRLLAVNDAWLALTGLRREDVIGRTTVELGHWSSAEER--- 83
           F  +F  SP          G +L VN A+    G  R+  +GR    L  W+  E+R   
Sbjct: 203 FARIFRTSPSPMIAQSARSGMILDVNPAFERCYGYTRDQALGRPDAFL--WADPEQREAY 260

Query: 84  --ARFVSQSPSTETVQHLRLRDGQMHRVRLHFTVIELSLEPLALVYMTEATREFEATEAL 141
             A F ++       + LR  DG      +   + +   + L +  +++ + + E  E L
Sbjct: 261 LGALFAARRAEQYPARGLR-ADGSTFEGLVSSEMGDDHEDKLVITTISDVSAQNEVMERL 319

Query: 142 REANLGLQQQVELHAAIEKLARVGHW-----TNAQHSDEVVWSLGLFD--IAGMEPRDLI 194
           R +              ++ A+  H+     T ++ SD  +  +        G+ P ++ 
Sbjct: 320 RRSE-------------DRFAKAFHFSPLNMTISRLSDGAIIEVNRAQDRAQGLLPEEIR 366

Query: 195 ARAEGRSG--IHPDDWEAW--EAARQA-MDGRQVEFRWRLPDGQQRWFRTRIGQTSVAGN 249
            +     G  + P D EA+  +  RQ  +DG   E R R  DG     R       + G 
Sbjct: 367 GKTSMEIGAWLTPQDREAFVEQLLRQGHIDG--YETRMRHKDGSLVDTRIWAELLDIDGE 424

Query: 250 PQTDFGVVQDITAEREASERLAEQLKLLQNVAARVPGMMYQARLR 294
           P         ITAE+   ER A  L + + VAA      + A  R
Sbjct: 425 P-CILACTVSITAEK---EREALLLNVARGVAAETGEAFFGALTR 465