Pairwise Alignments

Query, 1095 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 536 a.a., sensory box histidine kinase from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  182 bits (463), Expect = 4e-50
 Identities = 110/295 (37%), Positives = 163/295 (55%), Gaps = 6/295 (2%)

Query: 805  ECDIRMRHKAGHWIWVNTRGRVHKRDAQDRALFMSGTHLDITERVAAQEQVKALNASLEQ 864
            + + R+    G + WV  RG  H   A+   L ++ T  D+T      EQ    N  L Q
Sbjct: 219  DVEFRVVTATGAFRWVRCRGVPHV-GAKAVELPLTFTVQDVTLYKNLIEQRHRRNEDLNQ 277

Query: 865  RVSARTAELERSMRDMEAISYSIAHDLRAPLRSVNGFASIVLEDEADRLSPTGRDMFERI 924
            +V  RT +LE +   +E  SY+++HDLR PLR + GFA ++ E+             ++I
Sbjct: 278  QVLLRTRQLEEAYGSLEEFSYALSHDLRTPLRHIAGFAELLREEVIAGDVQGSLPYCDKI 337

Query: 925  ARSSRNMGQMITDMLELLRVVRVDLEPVPVDMHALAQSVVEALSSQASQARIDIQ---AM 981
             R++  M  +I  ML   R+ R  ++   VDM AL    V  L+      ++  +    +
Sbjct: 338  IRAAVQMRHLIDGMLSFARLGRKGMKVGEVDMAALVDETVGMLAIDVGMKKLRWRIQPGL 397

Query: 982  PPAMGDATLLRQVFSNLIDNGLKYSRHLAQPELAVGFDSRQRA--YFVRDNGMGFDMAHA 1039
            P   GD  LLR+V++NL+DN +KY+ H    E+ VG+ S      + VRDNG+GF+   A
Sbjct: 398  PKVQGDPVLLREVWANLLDNAVKYASHREVIEVEVGWRSLPDGTEFHVRDNGVGFEPGQA 457

Query: 1040 EKLFGLFQRLHAGSNVPGMGVGLAIVSRIVERHGGRVWAESAPGEGATFWLRLPL 1094
            E+LFG+FQRLH+     G G+GLA+V RIVE HGGR+WA++ P +GATF + LPL
Sbjct: 458  ERLFGMFQRLHSDPRFEGAGIGLALVRRIVEYHGGRIWADACPDQGATFHVFLPL 512



 Score = 42.0 bits (97), Expect = 1e-07
 Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 16/205 (7%)

Query: 47  RLLAVNDAWLALTGLRREDVIGRTTVEL--GHWSSAEERARFVSQSPSTETVQHLRL--- 101
           R++ VN A+  +TG   E+ +GR   EL  G  +S    +R  +     ++VQ   L   
Sbjct: 38  RIIWVNAAYSRITGWPLEECVGRRPAELLHGPQTSTLSLSRLGALLRQGQSVQDFELLNY 97

Query: 102 -RDGQMHRVRLHFTVIELSLEPLALVYMTEATREFEATEALREANLGLQQQVELHAAIEK 160
            R G+ + V L+   I  +   L      ++         L  A+  LQ ++EL    ++
Sbjct: 98  KRSGEPYWVSLNIEPIRDTAGRLTSYVSIQSDITERKKRELVMAD--LQHRLEL---AQR 152

Query: 161 LARVGHWTNAQHSDEVVWSLGLFDIAGM----EPRDLIA-RAEGRSGIHPDDWEAWEAAR 215
           LAR+G   + + +    W+  ++ I G     E RDL A  A   +   P    A + A 
Sbjct: 153 LARLGRIEHDEETGRSRWTSEIYRILGCERDEEERDLQAFVAHAHAQDRPALQAALDDAL 212

Query: 216 QAMDGRQVEFRWRLPDGQQRWFRTR 240
           ++ D   VEFR     G  RW R R
Sbjct: 213 RSGDEIDVEFRVVTATGAFRWVRCR 237



 Score = 38.5 bits (88), Expect = 1e-06
 Identities = 57/265 (21%), Positives = 91/265 (34%), Gaps = 12/265 (4%)

Query: 167 WTNAQHSDEVVWSLGLFDIAGMEPRDLIARAEGRSGIHPDDWEAWEAARQAMDGRQVEFR 226
           W NA +S    W L   +  G  P +L+    G               RQ    +  E  
Sbjct: 41  WVNAAYSRITGWPLE--ECVGRRPAELL---HGPQTSTLSLSRLGALLRQGQSVQDFELL 95

Query: 227 WRLPDGQQRWFRTRIGQTSVAGNPQTDFGVVQDITAEREASERLAEQLKLLQNVAARVPG 286
                G+  W    I          T +  +Q    ER+  E +   L+    +A R+  
Sbjct: 96  NYKRSGEPYWVSLNIEPIRDTAGRLTSYVSIQSDITERKKRELVMADLQHRLELAQRLAR 155

Query: 287 MMYQARLRADGSSTIPYVNDMVRTMLEIEPADLEQDTGILFRRVHPDDRAEVIAALAASA 346
           +    R+  D  +        +  +L  E  + E+D        H  DR  + AAL  + 
Sbjct: 156 L---GRIEHDEETGRSRWTSEIYRILGCERDEEERDLQAFVAHAHAQDRPALQAALDDAL 212

Query: 347 QRLMTLRLTYRVCLPTAGTRWHHVEAVPQREADGSVLWHGFSTDVTEARLATQKLERQHR 406
           +    + + +RV   T   RW     VP   A    L   F+  V +  L    +E++HR
Sbjct: 213 RSGDEIDVEFRVVTATGAFRWVRCRGVPHVGAKAVELPLTFT--VQDVTLYKNLIEQRHR 270

Query: 407 LIEAVRLAQSVYIEAEDKRKAFEGL 431
             E   L Q V +      +A+  L
Sbjct: 271 RNE--DLNQQVLLRTRQLEEAYGSL 293