Pairwise Alignments

Query, 1095 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 593 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  139 bits (351), Expect = 5e-37
 Identities = 78/254 (30%), Positives = 139/254 (54%), Gaps = 16/254 (6%)

Query: 844  DITERVAAQEQVKALNASLEQRVSARTAELERSMRDMEAISYSIAHDLRAPLRSVNGFAS 903
            D +E+ A +++++  N  L+ +            +++E  +Y  +HDL+ PL++V  F  
Sbjct: 351  DTSEKAAVKKEMQDFNKKLQVK-----------NKELEQFAYVASHDLQEPLQTVMSFTE 399

Query: 904  IVLEDEADRLSPTGRDMFERIARSSRNMGQMITDMLELLRVVRVDLEPVPVDMHALAQSV 963
             + E+  +    TG+   + I  ++  M Q+I  +L+  R+ R + +PV VD ++L   +
Sbjct: 400  FLSENYGEHFDETGKKSMQYIMEATGRMRQLIKGLLDYSRIGR-ERKPVMVDCNSLISDI 458

Query: 964  VEALSSQ--ASQARIDIQAMPPAMGDATLLRQVFSNLIDNGLKYSRHLAQPELAVGFDSR 1021
               LSSQ  A+ A I    +P   G+ T LR +F NLI NG+K+ +    P++ +G   +
Sbjct: 459  KVDLSSQIKATNASIHADNLPHIKGNYTELRLLFQNLITNGIKFHQEGVPPKIQIGVTKK 518

Query: 1022 QRAYF--VRDNGMGFDMAHAEKLFGLFQRLHAGSNVPGMGVGLAIVSRIVERHGGRVWAE 1079
               +   ++DNG+G +    E++F +FQRLH  +   G G+GLA   +IVE HGG++W  
Sbjct: 519  ADHWLFCIKDNGIGIENKFKERIFIIFQRLHTRNTYDGTGIGLAHCQKIVELHGGKIWVH 578

Query: 1080 SAPGEGATFWLRLP 1093
            S  G+G++F   +P
Sbjct: 579  SELGKGSSFLFTVP 592