Pairwise Alignments

Query, 299 a.a., Transmembrane regulator protein PrtR from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 310 a.a., anti-sigma factor from Paraburkholderia sabiae LMG 24235

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 81/300 (27%), Positives = 113/300 (37%), Gaps = 58/300 (19%)

Query: 13  VTEADLHAFVDGRLPAERQVEIAAYLAARPEDAQRLEAYRAQKRKLHAL-----LDPVLD 67
           V +  L A+VDG L  E + EI   L   PE A+R+E +RA     H       L PV D
Sbjct: 3   VDDIMLMAYVDGELDIEERREIERELDESPELAERIELFRASSLPFHDAFAQQKLPPVPD 62

Query: 68  EQ------------------PPQRLLKSARPRAV--------PQTPWY--LQRLAAGIAI 99
                               PP      A   AV        P  P    ++  A  +A+
Sbjct: 63  SLTRKIAELTRTHASATSTVPPGPAADPAANDAVAPSKAGVPPSAPIRSRMRFSAPWLAV 122

Query: 100 AVISGATGWGLRGGLPAGGDDAGRMAAAAPAERGLTLASAGGFAQRAAVAHAVYSPDARR 159
           A ++G    G+   L  G    G  +  A A+       A  +   AA   A+YS D   
Sbjct: 123 AFVAGVFCCGIALRLTPGVLSGGATSTVASAQ------PASPWVMAAAGYQALYSRDTVA 176

Query: 160 PVEVDAAHEDQLVAWLSKRMGAPMKPPHLQAQGYTLEGGRLLPGGQGPVAQFMYRNELGS 219
            V  D A   + VA + +  G P++ P L AQG T +  + L     P+ Q +Y  + G 
Sbjct: 177 -VTTDPAVSAKTVADIHEIDGLPVRVPDLSAQGLTFKRIQRLHFHDKPLVQIVYLPKSGG 235

Query: 220 KLTLYVSNDVADVGSAAGPDKALQAGVKNTDTAFRFAREGAVNVFYWVDGPFGYALSSDA 279
            + L V  D       A PD+++ A  K  D          +NV  W      YAL   A
Sbjct: 236 PVALCVVKD-------AKPDQSI-AQQKIDD----------MNVVTWRQSELSYALIGSA 277