Pairwise Alignments

Query, 334 a.a., DNA primase (EC 2.7.7.-), phage-associated from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 777 a.a., Putative P4-specific DNA primase from Escherichia coli ECRC98

 Score = 82.8 bits (203), Expect = 3e-20
 Identities = 86/298 (28%), Positives = 121/298 (40%), Gaps = 43/298 (14%)

Query: 10  VDAVKQRAHGRWTEILGAMGLDERLLKRKPMPCPVCKDGVDRFQYTDKFGEGNYHCRKCG 69
           V A    A G W  IL A+G+  ++LK +  PCPVC  G DRF++ D+ G G ++C +CG
Sbjct: 5   VTATVSHALGHWPRILPALGI--QVLKNRHQPCPVC-GGSDRFRFDDREGRGTWYCNQCG 61

Query: 70  PGGGFKLLQACKAMDFHAALCAVEKVLGMLPPAQP--------PDDATPERMKKLVQRIW 121
            G G KL++    +    A   V  V G LPPA P          DA  +    L Q + 
Sbjct: 62  AGDGLKLVEKVFGVSPSDAATKVAAVTGSLPPADPAVTAAAGAETDAARKNAAALAQTLM 121

Query: 122 NEARAVTLGDVVDRYLRGRGLALSSYPGSLRFHPALGYYQKEGVAKARKVAEYPAMLASV 181
            + R  T     + YL  +G     +PG        G ++  GV+        P      
Sbjct: 122 AKTRPGT----GNAYLTRKG-----FPGR-ECRMLTGTHRAGGVSWRAGDLVVPL----Y 167

Query: 182 QDAQGAVTLHRTYLQAGRKLDAPDAKKVLSGGFSGAAVRLAEPTDE----LAVCEGIETG 237
            D+   V L        + + A   K+ L GG         E  ++    L + EG  T 
Sbjct: 168 DDSGELVNL--------QLISADGRKRTLKGGQVRGTCHTLEGQNQAGKRLWIAEGYATA 219

Query: 238 IAVFLATRKPVWCALSAGNLEKL----WVPDTVRSVCVYGDNDADGDFTGQASAYAAA 291
           + V   T + V  ALS+ NL  L            + +  D D  GD  GQ  A AAA
Sbjct: 220 LTVHHLTGETVMVALSSVNLLSLASLARQKHPACQIVLAADRDLSGD--GQKKAAAAA 275