Pairwise Alignments

Query, 507 a.a., Mobile element protein from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 525 a.a., transposase from Pseudomonas simiae WCS417

 Score =  657 bits (1694), Expect = 0.0
 Identities = 321/521 (61%), Positives = 389/521 (74%), Gaps = 23/521 (4%)

Query: 4   VVEPQSLQSLSAEDLRELTTRLMTQ---LRHQ------------------SALLDKLTHE 42
           ++ P SL  L+ E LR L T++M +   L HQ                    +++KLTHE
Sbjct: 1   MISPPSLDQLNPEQLRALATQVMQRVETLDHQVDTLGKTVETMGRKIHRDRTVIEKLTHE 60

Query: 43  NALLKRMKFAAQSERFNPEQKSLLEDEIEADLAAVATEIDALQEAQAPAKVEEKKVPKRA 102
            A LKR KFA +SE+ +P Q  LL+D I+ D+AA+  E++ALQ    PA +E K+ PKR 
Sbjct: 61  IAQLKRFKFAKRSEQHSPAQAGLLDDLIDTDIAAIEAELEALQAK--PASIETKQKPKRT 118

Query: 103 PLPANLPRREIRHEPDSTTCACGCRMLRVGEDVAEKLDYVPGVFTVERHIRGKWACAQCE 162
            LP   PR  I HEPD+T CACGC + R+GEDV+EKLDY PGVFTVERHIRGKW C  CE
Sbjct: 119 ALPPQFPRTLIHHEPDNTQCACGCALKRIGEDVSEKLDYTPGVFTVERHIRGKWVCDDCE 178

Query: 163 TIHQVPVDPHIIDKGIPTTGLLAQVLVAKYADHLPLYRQEAIFSRAGLAIPRSTLAQWVG 222
           T+ Q PV   IIDKGIPT GLLAQV++AKY DHLPLYRQE IF RAGLAIPRSTLAQWVG
Sbjct: 179 TLIQAPVPAQIIDKGIPTAGLLAQVMIAKYGDHLPLYRQEQIFGRAGLAIPRSTLAQWVG 238

Query: 223 SCGVQLQPLVDAMRNELLQHRVLHADETPVSMLKPGNGKTHRAYLWAYATGAFETTKAVV 282
           +CGVQLQPLVDA+R  +L H V+HADETPV +L PG  KTHRAY+WAYA+ AF   KAVV
Sbjct: 239 TCGVQLQPLVDALRGVVLGHNVVHADETPVQVLMPGAKKTHRAYVWAYASSAFADIKAVV 298

Query: 283 YDFCESRSGEHARRFLGDWRGSLTCDDFSGYKALIASGVTEVGCLAHARRKFFDLHAANQ 342
           YDF  SR+GEHARRFL DW+G L CDDF GYKA  + GVTE+GC+AHARRKFF+LHA N+
Sbjct: 299 YDFTPSRAGEHARRFLQDWKGKLVCDDFGGYKASFSLGVTEIGCMAHARRKFFELHATNK 358

Query: 343 SQIAEFALQQLGQVYEIEREVKELPTDQRRAIRQQQTKPLLDALHQWMLLQRQRVPEGSA 402
           SQ+AE AL+ +  +YEIEREV++L  D RR IRQ++  P +D LH WM+ QR+R+ +G A
Sbjct: 359 SQLAEQALRYIQVLYEIEREVRDLEPDLRRRIRQEKAAPAMDVLHTWMIAQRERMHDGVA 418

Query: 403 TAKALDYSLRRWEALTRFVGDGQLPVDNNWIENQIRPIAIGRNNWLFAGSLRAGQRATAV 462
            AKA DYSL+RW AL+R++ DG +P+DNN  E QIRP A+GR NWL+AGSLR+GQRA A+
Sbjct: 419 IAKAFDYSLKRWTALSRYLDDGAVPIDNNHAEQQIRPWALGRKNWLYAGSLRSGQRAAAL 478

Query: 463 MSLIQSARMNGRDPYAYLRDVMARLPMQRASQIGALLPHRW 503
           MSLIQSA++NG DPYAYL+DV  RLP QRAS+I  LLPH W
Sbjct: 479 MSLIQSAKLNGHDPYAYLKDVFTRLPTQRASEIAELLPHNW 519