Pairwise Alignments

Query, 507 a.a., Mobile element protein from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 510 a.a., transposase from Pseudomonas putida KT2440

 Score =  307 bits (787), Expect = 5e-88
 Identities = 186/500 (37%), Positives = 279/500 (55%), Gaps = 22/500 (4%)

Query: 21  LTTRLMTQLRHQSAL-LDKLTH---ENALLKRMKFAAQSERFNPEQKSLLE--DEIEADL 74
           L  +L+ Q+ H+ A    K+ H   E ALL++  F  ++E+        L   DE E+ L
Sbjct: 14  LLKQLLEQMIHERASDKSKIVHLEEEVALLRQRLFGRKTEQTGDAATPQLPLFDEAES-L 72

Query: 75  AAVATEIDALQEAQAPAKVEEKKVPKRAPLPANLPRREIRHE--PDSTTCACGCRMLRVG 132
           A    E D  +E  AP K    +  KR PLPA+LPR E+ HE      TCACGCR   +G
Sbjct: 73  AEPLDEADD-EEVVAPTK----RRGKRKPLPADLPRIEVVHELPEHELTCACGCRKHAIG 127

Query: 133 EDVAEKLDYVPGVFTVERHIRGKWACAQCETIHQVPVDP-HIIDKGIPTTGLLAQVLVAK 191
           E+V+E+L+ VP    V +H+R  + C  CE+       P  +I+K + +  +LA +L  K
Sbjct: 128 EEVSEQLEIVPMQIRVIKHVRKVYGCRDCESAPVTADKPAQMIEKSMASPSVLAMLLTTK 187

Query: 192 YADHLPLYRQEAIFSRAGLAIPRSTLAQWVGSCGVQLQPLVDAMRNELLQHRVLHADETP 251
           Y D LPL+R E +  R G+ IPR TLA+WV  C    QPL++ MR  LL+ R++H DET 
Sbjct: 188 YVDGLPLHRFEKVLGRHGIDIPRQTLARWVIQCSEHFQPLLNLMRESLLKSRIIHCDETR 247

Query: 252 VSMLK-PGNGKTHRAYLWAYATGAFETTKAVVYDFCESRSGEHARRFLGDWRGSLTCDDF 310
           V +LK PG   + ++++W   TG       +++D+  SR+ E   R L  +RG +  DD+
Sbjct: 248 VQVLKEPGREPSSQSWMWVQ-TGGPPDRPVILFDYATSRAQEVPVRLLDGYRGYVMTDDY 306

Query: 311 SGYKALIAS-GVTEVGCLAHARRKFFD---LHAANQSQIAEFALQQLGQVYEIEREVKEL 366
           +GY AL A  G+  +GC AHARRKF +   +    ++  A+ AL  + ++Y +ER++K+ 
Sbjct: 307 AGYNALAAQDGLERLGCWAHARRKFVEAQKVQPKGKTGRADIALNLINKLYGVERDLKDS 366

Query: 367 PTDQRRAIRQQQTKPLLDALHQWMLLQRQRVPEGSATAKALDYSLRRWEALTRFVGDGQL 426
             + R+  R +++ PLL  L  W+   + +V   +A  KA+ Y    W  L R+V  G L
Sbjct: 367 DDEDRKVARMERSLPLLTQLKNWVEKTQPQVTTQNALGKAIGYLASNWSKLERYVEHGYL 426

Query: 427 PVDNNWIENQIRPIAIGRNNWLFAGSLRAGQRATAVMSLIQSARMNGRDPYAYLRDVMAR 486
           P+DNN  E  IRP  IGR NWLF+ + R    +  + SL+++A+ NG++PYA+LR  + R
Sbjct: 427 PMDNNAAERAIRPFVIGRKNWLFSDTPRGATASAQLYSLVETAKANGQEPYAWLRHALER 486

Query: 487 LPMQRA-SQIGALLPHRWHP 505
           LP   +     ALLP    P
Sbjct: 487 LPQAASVEDYEALLPWNCKP 506