Pairwise Alignments

Query, 395 a.a., ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score = 64.3 bits (155), Expect = 5e-15
 Identities = 69/285 (24%), Positives = 120/285 (42%), Gaps = 27/285 (9%)

Query: 63  FDWVTD-----FEKKTSCKVNVKTAGTSDEMVA--LMNEGGFDLVTASGDASMRLIAGKR 115
           FD++T      F+K +  K+      T++ + A  L    G+D+V  S     + I    
Sbjct: 36  FDYITPQTLTAFQKDSGVKLVYDIFDTNEALEAKLLTGNSGYDVVVPSNVFLAKQIEAGV 95

Query: 116 VQPVNVDLIPSYKTVDPRLQKAPWHYVNNTHYGTPYQWGWNVLMYNTTVFK-----DKPP 170
            QP++   +P+++ +DP L K          +  PY +G  ++ +N    K     + P 
Sbjct: 96  FQPLDRSKLPNWQHLDPALMKLIEANDPGNKFAVPYMYGTVLIGFNPAKVKAALGDNAPV 155

Query: 171 TSWNVVFEETTLPDGKSNKGRVQAFDGPIYIADAALYLMKKNPALGIKDPYELNEAQYKA 230
            SW+++F+E  +   K  +  V   D P  I   AL        LG+  P     A YK 
Sbjct: 156 DSWDLIFKEENI--AKLKQCGVALLDSPSEILPLALQY------LGL-PPNSDKPADYKK 206

Query: 231 ALDLLRGQRKLVGKYWHDAFVQIDDFTNEGVVA---SSSWQFMANILKSKNRPVAT--VV 285
           A +L+   R  +  Y+H +    D    +  VA   S S+   AN  +  N  V     +
Sbjct: 207 AEELMLKIRPHI-TYFHSSKYMADIANGDICVAVGYSGSFSQAANRAREANNGVVVDMRL 265

Query: 286 PAEGATGWADTTMLHADAKHPNCAYMWMEHSLNTKLQGDLAAWFG 330
           P EGA  W D   +   A +P  A+ ++ + L  ++   ++ + G
Sbjct: 266 PKEGAPIWFDMLAIPKGAANPEDAHTFINYLLRPEVIAPISDFVG 310