Pairwise Alignments

Query, 303 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 314 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score = 72.4 bits (176), Expect = 1e-17
 Identities = 59/259 (22%), Positives = 111/259 (42%), Gaps = 5/259 (1%)

Query: 10  VLLVLLTIVWGINWPIMKFGVTGMPPLTFRTICIWLGLPVLAAFLWWRKVPFRVPRE-HW 68
           V+ +++ + WG  W  +K  V  +PPLT   +   +  P+   F   R+ P   PRE  W
Sbjct: 25  VMFLIVCLSWGTTWLGIKIAVESVPPLTSAGLRFLIAFPLFLCFAMVRREPILFPRESRW 84

Query: 69  VELF-WLTVFNMLFWHTLAILAIQTLSSGRAAILGYTMPVFSALVGSWWFGQRLSGRAWG 127
             +F  L+ F++ ++  L       +SSG  A+L   MPVF  +  + +  +R+      
Sbjct: 85  FFVFVTLSYFSVPYY--LLNYGEMHVSSGLTALLFSCMPVFILIFSALFLRERIYLSQVV 142

Query: 128 GVAAAALGVALLLWHEFTQLS-GKPLGVVMMLVAAATWAVGTQMMRRTRIPLPTLTLSFW 186
           G+      + +++  +   L   +  GV+ +L AA   A+   + ++    +  +T +  
Sbjct: 143 GIGIGFGSLYMIIKSQGLHLDHAEFFGVLAILTAAIMHALCYVITKQKGSAISVITYNTL 202

Query: 187 VTALTAVWMTAMALVLERDAWVAPSPGIWWAILYNALGVFAFAQVAWLSLARDLPPIAST 246
              +  + +    L  E   + A +   W A+ Y  L       + +  L + L PI  +
Sbjct: 203 PIGIAGLMLFVAGLWFETPTFEAITLRSWGALFYLGLVASVGGFIVYFMLLKRLSPIILS 262

Query: 247 LSVMFIPVLGVFTGAWWLG 265
              +  PV  V  GAW+ G
Sbjct: 263 FVFIIFPVFAVIIGAWYEG 281



 Score = 37.0 bits (84), Expect = 6e-07
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 4/116 (3%)

Query: 11  LLVLLT--IVWGINWPIMKFGVTGMPPLTFRTICIWL-GLPVLAAFLWWRKVPFR-VPRE 66
           +L +LT  I+  + + I K   + +  +T+ T+ I + GL +  A LW+    F  +   
Sbjct: 170 VLAILTAAIMHALCYVITKQKGSAISVITYNTLPIGIAGLMLFVAGLWFETPTFEAITLR 229

Query: 67  HWVELFWLTVFNMLFWHTLAILAIQTLSSGRAAILGYTMPVFSALVGSWWFGQRLS 122
            W  LF+L +   +    +  + ++ LS    + +    PVF+ ++G+W+ G  +S
Sbjct: 230 SWGALFYLGLVASVGGFIVYFMLLKRLSPIILSFVFIIFPVFAVIIGAWYEGVSIS 285