Pairwise Alignments

Query, 303 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 301 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 76/280 (27%), Positives = 139/280 (49%), Gaps = 11/280 (3%)

Query: 12  LVLLTIVWGINWPIMKFGVTGMPPLTFRTICIWLGLPVLAAFLWWRKVPFR-VPREHWVE 70
           LV+LT++W  +W  MK   + +    F  +    G  VL   L  R    R  P ++ + 
Sbjct: 15  LVVLTLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRGMRPTPFKYTLA 74

Query: 71  LFWLTVFNMLFWHTLAILAIQTLSSGRAAILGYTMPVFSALVGSWWFGQRLSGRAWGGVA 130
           +  L    M+    LA  A+ +  +G+ AIL YTMP +  +  + + G+RL    +  + 
Sbjct: 75  IALLQTCGMV---GLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 131

Query: 131 AAALGVALLL--WH-EFTQLSGKPLGVVMMLVAAATWAVGTQMM-RRTRIPLPTLTLSFW 186
            AA G+ L+L  W  +F+ +    L ++  +   A+  V  ++  R  R+ L  L+L+ W
Sbjct: 132 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDL--LSLTSW 189

Query: 187 VTALTAVWMTAMALVLERDAWVAPSPGIWWAILYNALGVFAFAQVAWLSLARDLPPIAST 246
                A+ M+ +AL++ +   +   P ++WA+ Y+A+   A A   WL + ++LP   ++
Sbjct: 190 QMLYAALVMSVVALLVPQRE-IDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIAS 248

Query: 247 LSVMFIPVLGVFTGAWWLGEVLHWQDWAAVALVMVAIGSV 286
           LS + +PV GV    W LGE     + + + L+++A+  V
Sbjct: 249 LSTLAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALV 288