Pairwise Alignments

Query, 303 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 299 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score = 73.2 bits (178), Expect = 7e-18
 Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 18/290 (6%)

Query: 4   LSRQQLVLLVLLTIVWGINWPIMKFGVTGMPPLTFRTICIWLGLPVLAAFLWWRKVPFRV 63
           +SR+  VL +L+ +VWG+N+ ++K G+  MPPL    +   L       F+   KVP  +
Sbjct: 1   MSRKDGVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNL 60

Query: 64  PREHWVELFWLTVFNMLFWHTLAILAIQ-TLSSGRAAILGYTMPVFSALVGSWWFGQRLS 122
              + + + +   F  LF       AI   + +G A+++      F+ ++G++ FG+RL 
Sbjct: 61  LLGYGLTISF-AQFAFLF------CAINFGMPAGLASLVLQAQAFFTIMLGAFTFGERLH 113

Query: 123 GRAWGGVAAAALGVALLLWHEFTQLSGKPLGVVMMLVAAATWAVGT----QMMRRTRIPL 178
           G+   G+A A  GV +L+           LG ++ L AA +WA G     ++M  +  P 
Sbjct: 114 GKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRP- 172

Query: 179 PTLTLSFWVTALTAVWMTAMALVLERDAWVAPS-----PGIWWAILYNALGVFAFAQVAW 233
             ++L  W   +  +     +L+L+  A +  S          +++Y A          W
Sbjct: 173 AVMSLVIWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIW 232

Query: 234 LSLARDLPPIASTLSVMFIPVLGVFTGAWWLGEVLHWQDWAAVALVMVAI 283
            +L             + +PV+G+ + A  L E L    +    L+M  +
Sbjct: 233 GTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMTGL 282