Pairwise Alignments

Query, 303 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 303 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score = 80.5 bits (197), Expect = 4e-20
 Identities = 67/289 (23%), Positives = 135/289 (46%), Gaps = 9/289 (3%)

Query: 4   LSRQQLVLLVLLTIVWGINWPIMKFGVTGMPPLTFRTICIWLGLPVLAAFLWWRKVPFRV 63
           +  ++  +L+ L+++WG ++  +   V  +PP+T  T+ +   L  +A  +  R +  R+
Sbjct: 1   MDAREWAMLIALSLLWGGSFFFIGVAVKELPPVTIVTLRV--SLAAVALLVVCRIMGLRL 58

Query: 64  PREH--WVELFWLTVFNMLFWHTLAILAIQTLSSGRAAILGYTMPVFSALVGSWWFG-QR 120
           PRE   W   F + + N +    L +     ++SG A+IL  T P+F+ +V  +    ++
Sbjct: 59  PREWAVWRAFFGMGLLNNIIPFCLIVWGQTQIASGLASILNATTPLFTVIVAHFLTADEK 118

Query: 121 LSGRAWGGVAAAALGVALLLWHEFTQLSGKPLGVVMMLVAAATWAVGTQMMRRTR---IP 177
           ++G    GV    +GVA ++       S    G + +L AA +++      RR +   +P
Sbjct: 119 MTGNKLAGVLIGFVGVATMIGPAAFGGSSGLWGQIAILGAAISYSFAGIFGRRFKAMGVP 178

Query: 178 LPTLTLSFWVTALTAVWMTAMALVLERDAWVAPSPGIWWAILYNALGVFAFAQVAWLSLA 237
            P +T +  +++ T + + A  L+ +      P  G W A++  AL   A A + +  + 
Sbjct: 179 -PLMTATGQISSSTLMLIPAALLIDKPWTLAMPGLGTWGALIGIALLSTALAYLIFFRIL 237

Query: 238 RDLPPIASTLSVMFIPVLGVFTGAWWLGEVLHWQDWAAVALVMVAIGSV 286
                    L    IPV  +  G+  LGE L  + +A +A++   + ++
Sbjct: 238 ASAGATNLALVTFLIPVSAILLGSLILGEQLEIKHFAGMAMIAAGLAAI 286