Pairwise Alignments
Query, 1040 a.a., Excinuclease ABC subunit A from Hydrogenophaga sp. GW460-11-11-14-LB1
Subject, 987 a.a., excinuclease ABC subunit UvrA from Rhodanobacter sp. FW510-T8
Score = 1251 bits (3238), Expect = 0.0
Identities = 626/996 (62%), Positives = 764/996 (76%), Gaps = 59/996 (5%)
Query: 44 LSVRGARTHNLKNIDLDIPKHALVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 103
+ +RGARTHNLKNID+D+P+ L+VITGLSGSGKSSLAFDT+YAEGQRRYVESLS+YARQ
Sbjct: 4 IRIRGARTHNLKNIDIDLPRDRLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSSYARQ 63
Query: 104 FLQLMDKPDVDLIEGLSPAIAIEQKATSHNPRSTVGTVTEIHDYLRLLFARAGTPHCPDH 163
FL +M+KPDVD IEGLSPAI+IEQK+TSHNPRSTVGT+TE++DYLRLL+AR GTP CPDH
Sbjct: 64 FLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGTPRCPDH 123
Query: 164 HLPLTSQSVAQMVDTVLALPEGTRLMILAPVAREKKGEFTELFADMQAQGYVRFRVDGAV 223
+PL +Q+V+QMVD LAL R M+LAPV RE+KGE ++F ++AQG+VR RVDG V
Sbjct: 124 GIPLEAQTVSQMVDATLALDPERRYMLLAPVVRERKGEHVQVFEQLRAQGFVRARVDGTV 183
Query: 224 LEAEALPALKKTEKHNIDVVIDRIKVRADGEEEGVNPLRQRLAESFEAALRLADGRAIAV 283
+ +A+P L +KH I+VVIDR + R D ++QRLAESFE ALRL DG I
Sbjct: 184 FDLDAVPPLSLRQKHTIEVVIDRFRPRED--------IKQRLAESFETALRLGDGLVILA 235
Query: 284 EMDAA--EAGAA---PREHGFSARFACPLCHYTVGELEPRLFSFNSPMGACPTCDGLGHT 338
+MDAA AGAA E S+R++CP+C Y++ ELEPRLFSFNSP+GACPTCDGLG T
Sbjct: 236 DMDAAHGNAGAAAPEAPEQLLSSRYSCPVCDYSLPELEPRLFSFNSPVGACPTCDGLGVT 295
Query: 339 EFFDPARVVAFPSLSLASGAIKGWDRRNGYYFAMIESLAAHYRFNAEAPWESLPDAVQQV 398
+ FDPARVV+ P LSLASGA++GWDRRN +YF +I SLAAHY F+ +APW LP AVQ+
Sbjct: 296 QVFDPARVVSHPELSLASGAVRGWDRRNAHYFQLILSLAAHYGFDVDAPWNKLPAAVQKA 355
Query: 399 LLYGSGEDEVKFSYALESGERAGKKVSKKHPFEGIVRNFERRYRETDSAAVREELARYRA 458
+LYGSG++++ F Y E G KV+++HPFEGI+ N ERRY+ET+S AVREELA+Y +
Sbjct: 356 ILYGSGKEQIAFRYITE----RGGKVTREHPFEGILPNLERRYKETESVAVREELAKYIS 411
Query: 459 VQACPECAGSRLRREARHVFVGEGEQKQPIYKISHVTLGEALAYFQKLELHGAKGDIAAR 518
Q CP C G RL R AR+VFV + + ++H ++ +ALA+F L+L G +G+IA +
Sbjct: 412 DQPCPACEGQRLNRSARNVFVAD----HALPALTHRSIDDALAFFDGLKLTGWRGEIAVK 467
Query: 519 VINEIRQRLKFLNDVGLNYLSLDRSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIG 578
++ EIR+RL FLNDVGLNYL+LDR A++LSGGEAQRIRLASQIG+GL GVMYVLDEPSIG
Sbjct: 468 IVKEIRERLSFLNDVGLNYLTLDRQADSLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 527
Query: 579 LHQRDNDRLIATLQHLRDLGNTVLVVEHDEDMIRTADHVIDMGPGAGVHGGRVMAQGTCE 638
LHQRDN+RL+ TL LRDLGNTV+VVEHDED IR ADHV+D+GPGAGVHGG V+AQGT +
Sbjct: 528 LHQRDNERLLGTLTRLRDLGNTVIVVEHDEDAIRMADHVLDIGPGAGVHGGEVVAQGTVQ 587
Query: 639 QVMATPDSLTGQYLGGTRQIAVPARRTPWLPVVKKGEAPKAAPTKPRFPPSPAAERRAAR 698
++ +P S+TGQ+L G R I VP R
Sbjct: 588 DMLDSPRSVTGQFLSGVRAIEVPKER---------------------------------- 613
Query: 699 EAAHQATLGELQEIRVVNARGHNLKGASVAFPVGLLTCVTGVSGSGKSTLVNDTLYAAVA 758
+ + + + + A G+NLK +A P GL TCVTGVSGSGKSTLVNDTL+ A
Sbjct: 614 ----RQPIDDDSWLHLKGASGNNLKHVDLAIPAGLFTCVTGVSGSGKSTLVNDTLFRLAA 669
Query: 759 RTLYRSHDEPAAHDAIEGIEHFDKVINVDQSPIGRTPRSNPATYTGLFTGIRELMAEMPT 818
L + +PA + A EG++ FDKV+++DQSPIGRTPRSNPATYTGLFT +RE+ A++P
Sbjct: 670 VELNGASAQPAPYAAAEGLQLFDKVVDIDQSPIGRTPRSNPATYTGLFTPLREMFAQVPE 729
Query: 819 ARERGYGPGRFSFNVAGGRCEACQGDGVVKVEMHFLPDVYVPCEVCHGQRYNRETLDVQY 878
AR RGY GRFSFNV GGRCEAC+GDG++KVEMHFLPDVYVPC+VCHG+RYNRETL++ Y
Sbjct: 730 ARSRGYTAGRFSFNVRGGRCEACEGDGMLKVEMHFLPDVYVPCDVCHGKRYNRETLEILY 789
Query: 879 KGRNIAQILDMTVEQSHAFFSAVPTLHRKLQTLLDVGLSYIQLGQSATTLSGGEAQRVKL 938
KG IA +LDMTVE + F VPT+ RKL TL VGL YI+LGQSATTLSGGEAQRVKL
Sbjct: 790 KGHTIADVLDMTVEDALKLFENVPTIARKLDTLRAVGLDYIKLGQSATTLSGGEAQRVKL 849
Query: 939 ALELSKRDTGRTLYILDEPTTGLHFADIELLLKVLHQLRDAGNTIVVIEHNLDVIKTADW 998
+ ELSKRDTG TLYILDEPTTGLHF DIE LL VLHQL D GNT+VVIEHNLDVIKTADW
Sbjct: 850 SKELSKRDTGNTLYILDEPTTGLHFHDIEQLLDVLHQLVDQGNTVVVIEHNLDVIKTADW 909
Query: 999 VIDMGPEGGSGGGTVVAQGTPETIAAHPDSHTGRYL 1034
++D+GPEGG+GGG ++ GTPET+AA P SHTG +L
Sbjct: 910 IVDLGPEGGAGGGRILVSGTPETVAATPGSHTGHFL 945
Score = 139 bits (351), Expect = 8e-37
Identities = 80/203 (39%), Positives = 116/203 (57%), Gaps = 19/203 (9%)
Query: 462 CPECAGSRLRREARHVFVGEGEQKQPIYKISHVTLGEALAYFQKLELHGAKGDIAARVIN 521
C C G R RE + + I + +T+ +AL F+ +
Sbjct: 772 CDVCHGKRYNRETLEILY----KGHTIADVLDMTVEDALKLFEN--------------VP 813
Query: 522 EIRQRLKFLNDVGLNYLSLDRSAETLSGGEAQRIRLASQIGSGLTG-VMYVLDEPSIGLH 580
I ++L L VGL+Y+ L +SA TLSGGEAQR++L+ ++ TG +Y+LDEP+ GLH
Sbjct: 814 TIARKLDTLRAVGLDYIKLGQSATTLSGGEAQRVKLSKELSKRDTGNTLYILDEPTTGLH 873
Query: 581 QRDNDRLIATLQHLRDLGNTVLVVEHDEDMIRTADHVIDMGPGAGVHGGRVMAQGTCEQV 640
D ++L+ L L D GNTV+V+EH+ D+I+TAD ++D+GP G GGR++ GT E V
Sbjct: 874 FHDIEQLLDVLHQLVDQGNTVVVIEHNLDVIKTADWIVDLGPEGGAGGGRILVSGTPETV 933
Query: 641 MATPDSLTGQYLGGTRQIAVPAR 663
ATP S TG +L + A PAR
Sbjct: 934 AATPGSHTGHFLAPHLKPARPAR 956
Score = 63.5 bits (153), Expect = 7e-14
Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 7/124 (5%)
Query: 709 LQEIRVVNARGHNLKGASVAFPVGLLTCVTGVSGSGKSTLVNDTLYAAVARTLYRSHDEP 768
+ IR+ AR HNLK + P L +TG+SGSGKS+L DT+YA R S
Sbjct: 1 MDTIRIRGARTHNLKNIDIDLPRDRLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSSY 60
Query: 769 AAH-------DAIEGIEHFDKVINVDQSPIGRTPRSNPATYTGLFTGIRELMAEMPTARE 821
A ++ IE I+++Q PRS T T ++ +R L A + T R
Sbjct: 61 ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGTPRC 120
Query: 822 RGYG 825
+G
Sbjct: 121 PDHG 124
Score = 58.5 bits (140), Expect = 2e-12
Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 42 AFLSVRGARTHNLKNIDLDIPKHALVVITGLSGSGKSSLAFDTLY----AEGQRRYVESL 97
++L ++GA +NLK++DL IP +TG+SGSGKS+L DTL+ E +
Sbjct: 621 SWLHLKGASGNNLKHVDLAIPAGLFTCVTGVSGSGKSTLVNDTLFRLAAVELNGASAQPA 680
Query: 98 SAYARQFLQLMDKPDVDLIEGLSPAIAIEQKATSHNPRSTVGTVTEIHDYLRLLFAR 154
A + LQL DK + I+Q PRS T T + LR +FA+
Sbjct: 681 PYAAAEGLQLFDK-----------VVDIDQSPIGRTPRSNPATYTGLFTPLREMFAQ 726