Pairwise Alignments

Query, 1040 a.a., Excinuclease ABC subunit A from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 943 a.a., UvrABC system protein A from Acinetobacter radioresistens SK82

 Score = 1176 bits (3041), Expect = 0.0
 Identities = 591/1000 (59%), Positives = 742/1000 (74%), Gaps = 60/1000 (6%)

Query: 40   ASAFLSVRGARTHNLKNIDLDIPKHALVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSA 99
            + + + +RGARTHNLKN+ LDIP+   VVITGLSGSGKSSLAFDTLYAEGQRRYVESLSA
Sbjct: 2    SQSHIRIRGARTHNLKNVSLDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSA 61

Query: 100  YARQFLQLMDKPDVDLIEGLSPAIAIEQKATSHNPRSTVGTVTEIHDYLRLLFARAGTPH 159
            YARQFL  M+KP+VD IEGLSPAIAIEQK+TSHNPRSTVGT+TEI+DYLRLL+AR GTP+
Sbjct: 62   YARQFLSQMEKPEVDAIEGLSPAIAIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPY 121

Query: 160  CPDHHLPLTSQSVAQMVDTVLALPEGTRLMILAPVAREKKGEFTELFADMQAQGYVRFRV 219
            CP+H LP+ +Q+V++MVD V ALPEGT LM+LAPV RE+KGE++ LF  +Q+QG+VR RV
Sbjct: 122  CPEHDLPMVAQTVSEMVDAVKALPEGTALMLLAPVVRERKGEYSTLFEQLQSQGFVRARV 181

Query: 220  DGAVLEAEALPALKKTEKHNIDVVIDRIKVRADGEEEGVNPLRQRLAESFEAALRLADGR 279
            DG ++E +  P L K +KH I+V++DR KVR D        L  R+AESFE ALRL    
Sbjct: 182  DGEIIEIDTPPELDKKKKHTIEVIVDRFKVRDD--------LGNRIAESFETALRLGGDL 233

Query: 280  AIAVEMDAAEAGAAPREHGFSARFACPLCHYTVGELEPRLFSFNSPMGACPTCDGLGHTE 339
            A+   M          +  FSA+ +CP C   VG+LEPRLFSFN+P GACP CDGLG   
Sbjct: 234  AVLSWMKDEHP-----DRVFSAKHSCPDCDRAVGDLEPRLFSFNNPFGACPACDGLGTRS 288

Query: 340  FFDPARVVAFPSLSLASGAIKGWDRRNGYYFAMIESLAAHYRFNAEAPWESLPDAVQQVL 399
             F   +++  P LS++ GAI+GWDR+  YY++M++ +AAHY ++ E PW+ L   +Q+  
Sbjct: 289  HFSADKLIHNPELSISQGAIRGWDRQRPYYYSMLQKVAAHYDYSLETPWKDLGKDIQKKF 348

Query: 400  LYGSGEDEVKFSYALESGERAGKKVSKKHPFEGIVRNFERRYRETDSAAVREELARYRAV 459
            LYG+G +++  SY  E G R  + +    PFEG++ + ERRYRET+S  VR++L++Y + 
Sbjct: 349  LYGTGREKIDLSYVDERGRRHNRVM----PFEGVLPHLERRYRETESNYVRDDLSQYLSN 404

Query: 460  QACPECAGSRLRREARHVFVGEGEQKQPIYKISHVTLGEALAYFQKLELHGAKGDIAARV 519
             AC  C GSRL   +R+V + +      I +I+ +++G+A  Y++ L L GAKG+I  ++
Sbjct: 405  AACDVCDGSRLNEISRNVKILD----HTISQITRMSIGDAAHYYEHLHLEGAKGEIGDKI 460

Query: 520  INEIRQRLKFLNDVGLNYLSLDRSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGL 579
              EIR+RL FL  VGLNYLSL RSAETLSGGEAQRIRLASQIG+GL GVMYVLDEPSIGL
Sbjct: 461  FKEIRERLHFLVSVGLNYLSLARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGL 520

Query: 580  HQRDNDRLIATLQHLRDLGNTVLVVEHDEDMIRTADHVIDMGPGAGVHGGRVMAQGTCEQ 639
            HQRDNDRL+ TL  LRDLGNTVLVVEHDED IR ADH+ID+GPGAGVHGG V+A+GT ++
Sbjct: 521  HQRDNDRLLQTLIRLRDLGNTVLVVEHDEDAIRAADHIIDIGPGAGVHGGYVIAEGTADE 580

Query: 640  VMATPDSLTGQYLGGTRQIAVPARRTPWLPVVKKGEAPKAAPTKPRFPPSPAAERRAARE 699
            +    DSLTG+YL G  +IAVP +R                      PP P         
Sbjct: 581  LCQHKDSLTGKYLSGELKIAVPQQRVQ--------------------PPKPE-------- 612

Query: 700  AAHQATLGELQEIRVVNARGHNLKGASVAFPVGLLTCVTGVSGSGKSTLVNDTLYAAVAR 759
                      ++I+++ A GHNLK   +  P+G++TCVTGVSGSGKSTL+N TL    A 
Sbjct: 613  ----------KQIKLLGASGHNLKNVDLTIPLGVMTCVTGVSGSGKSTLINRTLLPLAAT 662

Query: 760  TLYRSHD-EPAAHDAIEGIEHFDKVINVDQSPIGRTPRSNPATYTGLFTGIRELMAEMPT 818
             L  +    P   D+I+G++  DKV+++DQSPIGRTPRSNPATYTG+FT IREL A+   
Sbjct: 663  QLNGATTLTPEKFDSIDGLQFLDKVVDIDQSPIGRTPRSNPATYTGVFTPIRELFAQTQE 722

Query: 819  ARERGYGPGRFSFNVAGGRCEACQGDGVVKVEMHFLPDVYVPCEVCHGQRYNRETLDVQY 878
            A+ RGY  GRFSFNV GGRCEAC+GDG++KV MHFLPD+YVPC+ CHG+RYNRETL+V Y
Sbjct: 723  AKARGYSAGRFSFNVKGGRCEACEGDGMIKVAMHFLPDMYVPCDACHGKRYNRETLEVGY 782

Query: 879  KGRNIAQILDMTVEQSHAFFSAVPTLHRKLQTLLDVGLSYIQLGQSATTLSGGEAQRVKL 938
            KG+NI+ +L+MTVE + AFF A+P +HR+L+TL  VGL YI+LGQSATTLSGGEAQRVKL
Sbjct: 783  KGKNISDVLEMTVEDAAAFFEAIPVIHRRLETLTQVGLGYIRLGQSATTLSGGEAQRVKL 842

Query: 939  ALELSKRDTGRTLYILDEPTTGLHFADIELLLKVLHQLRDAGNTIVVIEHNLDVIKTADW 998
            A EL+KRDTG+TLY+LDEPTTGLHF DI  LL +LH+LR+ GNTIVVIEHNLDVIKTADW
Sbjct: 843  ARELAKRDTGKTLYVLDEPTTGLHFHDIAKLLDILHELRNKGNTIVVIEHNLDVIKTADW 902

Query: 999  VIDMGPEGGSGGGTVVAQGTPETIAAHPDSHTGRYLRRLL 1038
            V+D+GPEGGSGGG ++A GTPE +A    SHTGR+L+ LL
Sbjct: 903  VVDLGPEGGSGGGQIIATGTPEEVAEVAISHTGRFLKPLL 942