Pairwise Alignments

Query, 254 a.a., Pca regulon regulatory protein PcaR from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 291 a.a., transcription regulatory protein (pca regulon) from Pseudomonas putida KT2440

 Score =  148 bits (374), Expect = 1e-40
 Identities = 84/241 (34%), Positives = 142/241 (58%), Gaps = 3/241 (1%)

Query: 3   ALYQGMAVLRVFDGEHSGLTLTEIAHKLGWSRTKPYRYVYTLEQMGYLVRQEGTKRYRPT 62
           +L +G+AV++ F      LT+ +I+H+    R    R ++TL ++GY      T    P 
Sbjct: 47  SLARGLAVIQAFQERKRHLTIAQISHRTEIPRAAVRRCLHTLIKLGYATTDGRTYSLLPK 106

Query: 63  SLTMTLGYSYLSGLSLLELAQPILDRLKNALGASVHMGILEQGEVVYIA-SARVSVVPAV 121
            LT  LG++YLS   L   AQP LDR+ + L  + +M  LE  +++YIA SA V  + +V
Sbjct: 107 VLT--LGHAYLSSTPLAISAQPYLDRISDQLHEAANMATLEGDDILYIARSATVERLISV 164

Query: 122 NIHVGSRVPPYVTSLGRALLSEMGDDQVDALIGKADLPASTPRSITKPAAFRQMLKTSRE 181
           ++ VG R+P Y TS+GR LL+ M D  +   + +ADL A T R++  P +    ++  R 
Sbjct: 165 DLSVGGRLPAYCTSMGRILLAAMDDTSLREYLERADLKARTSRTLNDPESLFACIQQVRA 224

Query: 182 QGYVFTDEEFHPGVRSIAAPVHDRKGEVVAAINATSIVQKFSDAYLAEQVVPLVVGAAEE 241
           QG+   D+E   G+RSIA PV+D  G+V+AA+N ++ V + + + L ++ +P+++ A+ +
Sbjct: 225 QGWCVVDQELEQGLRSIAVPVYDASGQVLAALNVSTHVGRVTRSELEQRFLPILLAASRD 284

Query: 242 I 242
           +
Sbjct: 285 L 285