Pairwise Alignments

Query, 326 a.a., transcriptional regulator, AraC family from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 311 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 93.6 bits (231), Expect = 6e-24
 Identities = 82/311 (26%), Positives = 146/311 (46%), Gaps = 14/311 (4%)

Query: 7   SSTMSTDAVAPGERAAIWRDWVWTHFGGLESDLYGDVGFDGHMHASHAGDVVLTKLEANR 66
           S+  ST AV+   R   W++ V  H    +S       FDG +  +  GD+ +  L +  
Sbjct: 4   STQYSTLAVSAPRRFDYWKEVVCRHCLAADSKPLSQSSFDGALAINTLGDLDICSLSSPL 63

Query: 67  HRVLRSPQLARGSERAYLKIVAPWQGSAGVQQHNREAWVRPGGWAIYDTTGSYEIANPER 126
           H   RS +  R      L +     G   ++Q  R+A +  G   +YD T ++  +    
Sbjct: 64  HYWERSERHLRSGPAEDLWLGFSRNGHGQIEQGGRKASLAAGNLFLYDATQAFRFSFGGT 123

Query: 127 VEHLIVMLPKEQLSERGLRLEPLMARHVGGVSGIARVALETMRTTYQELPG-----MSEN 181
             HL V +P+  L+ER     P +A +   V    R  +  +R   ++          E+
Sbjct: 124 ENHL-VRIPRALLTER----LPRIADYTAMVLDDRRPGVVPLREMLRQAASSPMSLQDEH 178

Query: 182 AARGAGELIVELVRLSLQELSGRENGTTQLEAFRDRIREHIGQHLRDPSLTLDHIAQALN 241
            +      +++L+ +SL EL   +    +L+ +  RI ++I +HL +P L++D IAQA N
Sbjct: 179 ISNRYSGALIDLLVISL-ELQDLKTTHQELDLY-GRIMQYIQRHLTEPDLSIDVIAQAHN 236

Query: 242 CSKRHLHKAFSAEDDTLAHYIQRQRIQACMRELAHPSRAHRTITEIAFSWGFNNGAHFSR 301
            S R + +AF+    T    I ++R+ A  RE     +  R++++ A  +GF++ +HFS 
Sbjct: 237 VSTRTVTRAFARYQKTPVAEIWKERLNA-SREAIERGQV-RSVSQAALDFGFSDFSHFSH 294

Query: 302 VFREHTGQSPS 312
            FR+  G +P+
Sbjct: 295 AFRKAFGVAPN 305