Pairwise Alignments

Query, 269 a.a., Probable lipoprotein signal peptide from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 357 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  105 bits (261), Expect = 2e-27
 Identities = 82/280 (29%), Positives = 118/280 (42%), Gaps = 22/280 (7%)

Query: 9   VQGQALPLILMSHGTGGSLLGHFDTAIALADAGFVVAAVTHTGDNYADQ--SRSVDIMDR 66
           VQ   LPL+L+SHG+G  + G    A  LA  GF+VA   H G    D   + +  I +R
Sbjct: 76  VQPGRLPLVLLSHGSGSRVSGMAWIAEKLASEGFIVAGTNHPGTTSGDSTPADTPKIWER 135

Query: 67  PRQITRVINHMLSSWGGRAAIDPARVGMFGFSAGGFTTLANIGAVPDFSTIGPMCRQYPG 126
              ++ ++  + +     A+ID  R+G+ GFS GG   +   GA  D       C +   
Sbjct: 136 TSDLSAIVTALTTQGKWSASIDAGRIGVLGFSLGGSAAMEISGARADLEAYARYCEKEAA 195

Query: 127 DFACQLLAKSGNAVTPPAAS-------TLASA------ADARIKAAVVAAPALGFTFAPE 173
              CQ        V     S       TL  A       D RI++AV+  P L   F PE
Sbjct: 196 MMDCQWFDGGQAYVNNEPVSVPKLDLRTLDKARFEQQNRDPRIRSAVLVDPGLALAFQPE 255

Query: 174 GLKNVKVPVQLWRAENDAILPHPRYAEVVRLGLPQAPDYRVVSNAGHFDFLAPC----SS 229
            L+ + +P+      +   +P    A+ +   +P A  YR V  A HF FL  C    S+
Sbjct: 256 SLRKIDIPLTFINLGSKGKIPPAVLADRLAAEVPGA-TYRQVDEADHFSFLPLCKEGASA 314

Query: 230 ALASIA--PDICTSAPGFDRVAFHASFNAAVVGFFSKALK 267
            L S+     IC      DR   HA     +V  F++ LK
Sbjct: 315 FLKSVGERDPICEPTGPRDRSDIHAELEKMIVAAFNRTLK 354