Pairwise Alignments

Query, 389 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 368 a.a., Putrescine-binding periplasmic protein SpuD from Xanthobacter sp. DMC5

 Score =  282 bits (722), Expect = 9e-81
 Identities = 148/364 (40%), Positives = 214/364 (58%), Gaps = 8/364 (2%)

Query: 32  APVAAAPAAPAGPVLDDEKVLNVYNWPDYITETLIADFEKEYGVKVNYDTFENNEALHAK 91
           A V  A     G     +KV+NV+NW DYI  T++ DF KE G+KV YD F++NE L  K
Sbjct: 7   AAVVVATLGLTGVATAQDKVVNVFNWSDYIDPTVLEDFTKETGIKVRYDVFDSNEVLETK 66

Query: 92  LVAGNSGYDIVIPTAGFAKKQIDGGLYQPIDKSKLKNYGNLDTDFMAKIAGVDPDNKHLV 151
           L+AG +GYD+V+P+  F ++QI  G++ P+DKSKL N      +   ++A  DP N H V
Sbjct: 67  LLAGKTGYDVVVPSGSFLQRQIKAGVFIPLDKSKLPNLQYAWPEVTQRLAVYDPGNAHAV 126

Query: 152 PWAWGFTTVGINKQKVEKALGGMPMPENAWDLVFKPEYSSKLKSCGIAYLDSPSEILPVA 211
            + WG T +G N  KV++ LG +P+  N WD++FKPE  SKLK CG+  LD P E++P A
Sbjct: 127 NYMWGTTGIGYNVDKVKERLGDIPL--NTWDIIFKPEILSKLKDCGVYVLDGPEEVIPTA 184

Query: 212 LHYVGKPAYSENPEDFKLAGEMLKKVRKDVRLF-SSTMIDDIAGGKACAFIGWSGDINIA 270
           + Y+G    S+NPED   AGE+L  +R  ++ F SS  I+ +A G  C  +GWSGD+  A
Sbjct: 185 MKYLGLDPNSKNPEDIAKAGELLMTIRPYIKKFDSSGYINALARGDICIALGWSGDVYQA 244

Query: 271 AGRVKETGGKDEIVP-----LLPTGGGLVFIDTMAIPKDAKHVNNAHVFMDFYLRAANAA 325
             R +E   K +  P     +LP  G L++ D  AIPKDAK+++NA  F+++ ++   AA
Sbjct: 245 KTRAQEAAKKTKKKPVNVDYVLPKEGALMWFDNFAIPKDAKNIDNALAFINYMMKPEVAA 304

Query: 326 AMANELNYPTGNKAALADIKDEVKGNKTTFLGPEDTARLIPTGGFSNDVSGVVNETYNAF 385
             +N ++Y  GN A+   I  E+  N + +   E   RL         V  V+ +T+N F
Sbjct: 305 KNSNFISYANGNLASQKFIDKEIMDNPSIYPTKEVFDRLFIVTTNEPPVQRVITKTWNTF 364

Query: 386 KRGK 389
           KRGK
Sbjct: 365 KRGK 368