Pairwise Alignments

Query, 389 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  266 bits (679), Expect = 9e-76
 Identities = 142/356 (39%), Positives = 205/356 (57%), Gaps = 2/356 (0%)

Query: 34  VAAAPAAPAGPVLDDEKVLNVYNWPDYITETLIADFEKEYGVKVNYDTFENNEALHAKLV 93
           +AA   A A     +++ L VYNW DYIT   +  F+K+ GVK+ YD F+ NEAL AKL+
Sbjct: 12  IAATLFAGALHAQAEQRTLRVYNWFDYITPQTLTAFQKDSGVKLVYDIFDTNEALEAKLL 71

Query: 94  AGNSGYDIVIPTAGFAKKQIDGGLYQPIDKSKLKNYGNLDTDFMAKIAGVDPDNKHLVPW 153
            GNSGYD+V+P+  F  KQI+ G++QP+D+SKL N+ +LD   M  I   DP NK  VP+
Sbjct: 72  TGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEANDPGNKFAVPY 131

Query: 154 AWGFTTVGINKQKVEKALGGMPMPENAWDLVFKPEYSSKLKSCGIAYLDSPSEILPVALH 213
            +G   +G N  KV+ ALG    P ++WDL+FK E  +KLK CG+A LDSPSEILP+AL 
Sbjct: 132 MYGTVLIGFNPAKVKAALGD-NAPVDSWDLIFKEENIAKLKQCGVALLDSPSEILPLALQ 190

Query: 214 YVGKPAYSENPEDFKLAGEMLKKVRKDVRLF-SSTMIDDIAGGKACAFIGWSGDINIAAG 272
           Y+G P  S+ P D+K A E++ K+R  +  F SS  + DIA G  C  +G+SG  + AA 
Sbjct: 191 YLGLPPNSDKPADYKKAEELMLKIRPHITYFHSSKYMADIANGDICVAVGYSGSFSQAAN 250

Query: 273 RVKETGGKDEIVPLLPTGGGLVFIDTMAIPKDAKHVNNAHVFMDFYLRAANAAAMANELN 332
           R +E      +   LP  G  ++ D +AIPK A +  +AH F+++ LR    A +++ + 
Sbjct: 251 RAREANNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAHTFINYLLRPEVIAPISDFVG 310

Query: 333 YPTGNKAALADIKDEVKGNKTTFLGPEDTARLIPTGGFSNDVSGVVNETYNAFKRG 388
           YP  NK A   +   ++ N   +   E  A+L      + +        +   K G
Sbjct: 311 YPNPNKDATDKVNPTIRNNPNLYPTAEAMAKLYTLKPLTRNAERARTRAWTRIKSG 366