Pairwise Alignments

Query, 500 a.a., Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 510 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  369 bits (948), Expect = e-106
 Identities = 202/492 (41%), Positives = 304/492 (61%), Gaps = 4/492 (0%)

Query: 8   IELRGIVKRFGPVQVLHGVDLAFEPGRVYGLLGENGAGKSTLMKILAGYEQPSEGALQVN 67
           +E+RGI + F  V+ L GVD+A  PG+V  L+GENGAGKSTL+KIL G  +P+EG + ++
Sbjct: 20  LEMRGISQIFPGVKALDGVDIALYPGKVTALIGENGAGKSTLVKILTGIYRPNEGEILLD 79

Query: 68  GRAVRFDGPRAAEAEGIVLIHQEFNLAEDLTVAQNIFLGHEKKRHGFWLDDSAMRATARR 127
           G+AV F   + A   G+  IHQE  L ++L+V +NIFLGH  K     +D   +   AR 
Sbjct: 80  GKAVHFHSAQDAIDAGVTAIHQETVLFDELSVGENIFLGHAPKGRFGLIDWKTINERARI 139

Query: 128 VLDDVGLAKVHPDTRVRDLIVAERQLVEIAKALSRHARVLIMDEPTATLTPGETGRLFEL 187
           +L+ +  + + P  R++DL +A+R LV IA+ALS  AR++IMDEPTA L+  E   LF +
Sbjct: 140 LLEQLE-STIDPTIRLKDLSIAQRHLVAIARALSVEARIVIMDEPTAALSRKEIDDLFRI 198

Query: 188 VARLQADGVTVVFISHKLDEVERITEEVIVMRDGRLVAQQATATLTRAQMANLMVGRELA 247
           V  L+  G  ++FISHK DEV  I E   V RDG++V     AT  + ++  LMVGR++ 
Sbjct: 199 VENLKRQGKAILFISHKFDEVYEIAENYAVFRDGKMVGAGTLATTPQDEIVRLMVGRDVT 258

Query: 248 DLYPPRTEVPADAPVLLSVRALSVPGWAQDVSFEVRAGEVFGFAGLVGAGRTELFEGLLG 307
           + +P +       P +LSVR  S     +D+S ++R GE+ G  GL+GAGR+EL + L G
Sbjct: 259 NAFPKQAVTLG--PTVLSVRDYSHQTEFRDISLDLRKGEILGLYGLIGAGRSELCQSLFG 316

Query: 308 LRERRAQAVQVAGRALLPRSPREAANAGLTYLSEDRKGRGLHVRFGLRENLTLMALQRHA 367
           +    +  V + G+ L  RSP +A  AG+ Y+ E+R   GL +   + +N++L +L R +
Sbjct: 317 ITRPASGEVTLDGQPLTIRSPEDAIRAGIVYVPEERGRHGLALDMPIYQNMSLPSLTRTS 376

Query: 368 RP-WLQPASEVAALAQAVREFGIRTGSLDVPAGSLSGGNQQKLALAKVLHPDPRVVVLDE 426
           R  +L  A+E A   +      +R  +L VP G+LSGGNQQK+ + K L   P+V++LDE
Sbjct: 377 RKGFLTAANEFALARKYAARLDLRAAALSVPVGTLSGGNQQKVVIGKWLATKPKVIILDE 436

Query: 427 PTRGVDIGAKRDIYALIQRLAASGRAVVVISSELMELIGLCHRVAVMRSGRLQATLSAAD 486
           PT+G+DIG+K  ++  I  LAA G ++++ISSEL E++G+  R  VMR G +      A+
Sbjct: 437 PTKGIDIGSKAAVHGFISELAAEGLSIIMISSELPEILGMSDRAIVMREGLMAGQFERAE 496

Query: 487 LNEQELIAHATG 498
            + ++L+  ATG
Sbjct: 497 FSPEKLVRAATG 508