Pairwise Alignments

Query, 500 a.a., Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 492 a.a., ABC transporter, nucleotide binding/ATPase protein (ribose) from Agrobacterium fabrum C58

 Score =  364 bits (935), Expect = e-105
 Identities = 213/493 (43%), Positives = 305/493 (61%), Gaps = 10/493 (2%)

Query: 8   IELRGIVKRFGPVQVLHGVDLAFEPGRVYGLLGENGAGKSTLMKILAGYEQPSEGALQVN 67
           + LRGI KR+GP++VL  VDL   PG V  LLGENGAGKSTL  I+AG  +PSEG +   
Sbjct: 6   LSLRGISKRYGPLEVLKSVDLEVYPGEVVALLGENGAGKSTLSGIIAGSREPSEGKMTWL 65

Query: 68  GRAVRFDGPRAAEAEGIVLIHQEFNLAEDLTVAQNIFLGHEKKRHGFWLDDSAMRATARR 127
           G+  +   PR A  +GIVLIHQE  L  +L++A+N+F+G    ++G  +D + M    RR
Sbjct: 66  GQPYQPASPREAIDKGIVLIHQELKLLPELSIAENVFIGRWPMKNGI-VDRAEM---VRR 121

Query: 128 VLDDVGLAKVH-PDTR-VRDLIVAERQLVEIAKALSRHARVLIMDEPTATLTPGETGRLF 185
               +    +H P TR V  L  A +QL+EIAKAL+  A++LI+DEPTA L   ET  LF
Sbjct: 122 AQQQLARLNLHIPATRKVAGLSTANQQLIEIAKALALDAKLLILDEPTAALGGAETQALF 181

Query: 186 ELVARLQADGVTVVFISHKLDEVERITEEVIVMRDGRLVAQQATATLTRAQMANLMVGRE 245
           E V +L+A+GV +++ISH+++E+ +IT+ ++V+RDG  V + A +      +   MVGR 
Sbjct: 182 EQVRKLRAEGVGIIYISHRMEEIRQITDRIVVLRDGERVHEFADSATPVRTIVESMVGRS 241

Query: 246 LADLYPPRTEVPADAPVLLSVRALS-VPGWAQDVSFEVRAGEVFGFAGLVGAGRTELFEG 304
           L  L+P   E      V+L V+ L+      +D+SF VRAGE+ G AGL+GAGRTEL   
Sbjct: 242 LERLFPALPE--PQEKVVLEVKGLTGATNAFRDISFGVRAGEILGIAGLIGAGRTELVRA 299

Query: 305 LLGLRERRAQAVQVAGRALLPRSPREAANAGLTYLSEDRKGRGLHVRFGLRENLTLMALQ 364
           + G     A  V++ G  L  +SP +A   G+  + EDRK +GL V   + ENL    L 
Sbjct: 300 ISGADPTSAGEVRLDGEVLSLKSPADAIAKGIVMVPEDRKLQGLVVEHEIGENLIYANLD 359

Query: 365 RHARPWLQPASEVAALAQAVREFGIRTGSLDVPAGSLSGGNQQKLALAKVLHPDPRVVVL 424
           R    W+ PA + A    A+ +FG++ G  + PA  LSGGNQQK+ +AK L  +PRVVVL
Sbjct: 360 RVGTGWITPAIKRAFTRDAIAKFGVK-GRSEQPASDLSGGNQQKVVIAKWLARNPRVVVL 418

Query: 425 DEPTRGVDIGAKRDIYALIQRLAASGRAVVVISSELMELIGLCHRVAVMRSGRLQATLSA 484
           DEPTRG+D+GA+  IY +I  LA  G AV+V+SS+L E++G+ +R+ V+  G+    L+ 
Sbjct: 419 DEPTRGIDVGARAGIYDIIVGLAKDGVAVIVVSSDLEEVLGVSNRILVLAQGKQAGILNR 478

Query: 485 ADLNEQELIAHAT 497
            + N+  ++  AT
Sbjct: 479 DEANDVSVMELAT 491