Pairwise Alignments

Query, 692 a.a., ATP-dependent DNA helicase Rep from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 674 a.a., ATP-dependent DNA helicase Rep from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  502 bits (1293), Expect = e-146
 Identities = 299/695 (43%), Positives = 416/695 (59%), Gaps = 37/695 (5%)

Query: 5   LNIAQLEAVNHLAGPCLVLAGAGSGKTRVITHKIGRLIQA-GLAADRIAAITFTNKAAAE 63
           LN  Q  AV  + GPCLVLAGAGSGKTRVIT+KI  LI+  G  A  IAA+TFTNKAA E
Sbjct: 3   LNPGQQHAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAARE 62

Query: 64  MRERAAQLVGR-DARKVLICTFHALGVRLLRDDGEVLGLKKQFSILDTDDITSMLKDCGG 122
           M+ER  Q +GR +AR ++I TFH LG+ +++ +   LG+K  FS+ D  D  ++LK+   
Sbjct: 63  MKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKSNFSLFDDTDQVALLKELTE 122

Query: 123 ---TTDTATARGWQWAISAWKGAGMNAAQCLAQAKDEDERVTATIMARYEERLVAYQSVD 179
                D    +     IS WK      AQ  A AK E +R+ A     Y+  + A   +D
Sbjct: 123 GLIEDDKVLLQQLISTISNWKNDLKTPAQAAAGAKGERDRIFAHCYGLYDAHMKACNVLD 182

Query: 180 FDDLITLPLKLLREHEDVRARWQKKMGHVLVDEYQDTNATQYELLKLLVGERGRFTAVGD 239
           FDDLI LP  LL+ +++VR RWQ K+ ++LVDEYQDTN +QYEL+KLLVG+R RFT VGD
Sbjct: 183 FDDLILLPTLLLQRNDEVRERWQNKIRYLLVDEYQDTNTSQYELVKLLVGQRARFTVVGD 242

Query: 240 DDQSIYGWRGATLDNLKKLPQDYPELKVIKLEQNYRSTSAILRAANNVIGPNPKLFPKTL 299
           DDQSIY WRGA   NL  L QD+P L+VIKLEQNYRS+  IL+AAN +I  NP +F K L
Sbjct: 243 DDQSIYSWRGARPQNLVLLSQDFPALQVIKLEQNYRSSGRILKAANILIANNPHVFEKRL 302

Query: 300 WSDLGEGEPVRVVDADNEEHEAERAVARILSLRASSQHKEWRDFAILYRANHMARPFEQS 359
           +S+LG G  ++V+ A+NEEHEAER    +++    ++  +++D+AILYR NH +R FE+ 
Sbjct: 303 FSELGYGAELKVLSANNEEHEAERVTGELIAHHFVNK-TQYKDYAILYRGNHQSRVFEKF 361

Query: 360 LRRAQVPYKVSGGQSFFDKAEIRDLCAWLRLLVNNNDDPAFLRSATTPKRGIGHTTLQQL 419
           L + ++PYK+SGG SFF + EI+DL A+LR+L N +DD AFLR   TPKR IG  TLQ+L
Sbjct: 362 LMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLQKL 421

Query: 420 GAFATQYKLSLFEALFANSLGTALPPRAVATLHEFGRAVNDLEYRARHTLGHEAARAFLT 479
           G +A     SLF A F   L   L  R   +L  F   + +++      L      A + 
Sbjct: 422 GEWAMTRNKSLFTASFDMGLSQKLTGRGYDSLTRFTHWLGEIQ-----RLAEREPVAAVR 476

Query: 480 EWLKDIDYEKHLYDSEDNEKVAAARWTNVMDFCDWVAGRCGGKLEEEDGVKIETERKSLL 539
           + +  IDYE  LY++  + K A  R  NV     W+        E  +G +++ E  +L 
Sbjct: 477 DLIHGIDYESWLYETSPSPKAAEMRMKNVNQLFSWMT-------EMLEGNELD-EPMTLT 528

Query: 540 EVVQTIALLSTL--SEREQDQNVVTLSTLHASKGLEWPHVMLVGVNEGLLPFKMEEEPGQ 597
           +VV    L   +   E E++ + V L TLHASKGLE+P+V +VG+ EG LP         
Sbjct: 529 QVVTRFTLRDMMERGESEEELDQVQLMTLHASKGLEFPYVYMVGMEEGFLPH-------- 580

Query: 598 SDAQAADMAQRLQEERRLMYVGITRAQRTLAVSWLKRRKKGRESIPGLASRFIKEMALDQ 657
              Q++     ++EERRL YVGITRAQ+ L  +  K R++  E +    SRF+ E+  D 
Sbjct: 581 ---QSSIDEDNIEEERRLAYVGITRAQKELTFTLCKERRQYGELVRPEPSRFLLELPQDD 637

Query: 658 ATVKEDPR-----EKLRALRAEFAQRATQQAAQKA 687
              +++ +     E+++  ++  A      AA++A
Sbjct: 638 LIWEQERKVVSAEERMQKGQSHLANLKAMMAAKRA 672