Pairwise Alignments

Query, 692 a.a., ATP-dependent DNA helicase Rep from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 752 a.a., Superfamily I DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  362 bits (930), Expect = e-104
 Identities = 232/662 (35%), Positives = 361/662 (54%), Gaps = 41/662 (6%)

Query: 4   GLNIAQLEAVNHLAGPCLVLAGAGSGKTRVITHKIGRLIQA-GLAADRIAAITFTNKAAA 62
           GLN  Q EAV H  GP +++AGAGSGKTRV+T +I  LI+A  +   +I A+TFTNKAA+
Sbjct: 6   GLNPPQREAVEHTEGPLMIIAGAGSGKTRVLTFRIAHLIRAKNVDPFQILALTFTNKAAS 65

Query: 63  EMRERAAQLVGRDARKVLICTFHALGVRLLRDDGEVLGLKKQFSILDTDDITSMLK---- 118
           EMR R  +L+G +AR   + TFH++  ++LR + E LG    F+I DTDD  S++K    
Sbjct: 66  EMRNRIERLIGLEARNTWMGTFHSIFAKILRVESEKLGFPSNFTIYDTDDSKSLIKSIVK 125

Query: 119 -----DCGGTTDTATAR--GWQWAISAWKGAGMNAAQCLAQAKDEDERVTATIMARYEER 171
                D     +T  +R  G +  + +W+   +N     A  +   +     I   Y++R
Sbjct: 126 EKRLDDKVYKPNTVLSRISGAKNRLISWENY-INDPYIKADDEAAMKPRMGEIYRAYQKR 184

Query: 172 LVAYQSVDFDDLITLPLKLLREHEDVRARWQKKMGHVLVDEYQDTNATQYELLKLLVGER 231
           L    ++DFDDL+     L R+H DV  ++Q++  +VLVDE+QDTN +QY + K L    
Sbjct: 185 LFKSSAMDFDDLLFNTNVLFRDHPDVLNKYQQRFRYVLVDEFQDTNLSQYLITKKLAAVH 244

Query: 232 GRFTAVGDDDQSIYGWRGATLDNLKKLPQDYPELKVIKLEQNYRSTSAILRAANNVIGPN 291
                VGDD QSIY +RGA + N+    +DYP+L V+KLEQNYRST  I+ AAN++I  N
Sbjct: 245 QNICVVGDDAQSIYAFRGADIQNILNFEKDYPDLHVVKLEQNYRSTKNIVEAANSIIEKN 304

Query: 292 PKLFPKTLWSDLGEGEPVRVVDADNEEHEAERAVARILSLRASSQHKEWRDFAILYRANH 351
                K +W+  G G+ + ++ + ++  E  R VA  +    +++  +  DFAILYR N 
Sbjct: 305 KAQLKKNVWTQNGNGDLIELIKSASDNEEG-RMVASTIFEEKNNKKLQNSDFAILYRTNS 363

Query: 352 MARPFEQSLRRAQVPYKVSGGQSFFDKAEIRDLCAWLRLLVNNNDDPAFLRSATTPKRGI 411
            +R  E++LR+  + YK+ GG SF+ + EI+DL A+ R +VN +D+ AF R    PKRGI
Sbjct: 364 QSRALEEALRKMNISYKIVGGLSFYQRKEIKDLMAYFRYVVNQDDEEAFKRIINYPKRGI 423

Query: 412 GHTTLQQLGAFATQYKLSLFEALFANSLGTALPPRAVATLHEFGRAVNDLEYRARHTLGH 471
           G ++++++   A ++ + L++ +  +S  + L  RA  ++ +F   +   +        +
Sbjct: 424 GLSSVEKMMVAAYEHDIPLWQVVTNSS--SFLSGRASNSVSDFATMIKSFQMEVERKDAY 481

Query: 472 EAARAFLTEWLKDIDYEKHLYDSEDNEKVAAARWTNVMDFCDWVAGRCGGKLEEEDGVKI 531
           EAA        K     + LY  ED       R+ NV +  + +         +E     
Sbjct: 482 EAASTI----AKQSGLLRELY--EDKTIEGLNRYENVQELLNAI---------KEYVDNP 526

Query: 532 ETERKSLLEVVQTIALLSTLSEREQDQNVVTLSTLHASKGLEWPHVMLVGVNEGLLPFKM 591
           E E K+L   +Q IALL+     + + + VTL T+H+SKGLE+  V +VG+ E L P +M
Sbjct: 527 ENEDKNLGAFLQEIALLTDNDRDKDEMDAVTLMTIHSSKGLEFRQVFVVGLEEDLFPSQM 586

Query: 592 EEEPGQSDAQAADMAQRLQEERRLMYVGITRAQRTLAVSWLKRRKKGRESIPGLASRFIK 651
             +  +           L+EERRL YV  TRA   L +S+   R +    +    SRF++
Sbjct: 587 MMQSRED----------LEEERRLFYVATTRAMEKLYLSYAITRYRFGRLLNCEPSRFLE 636

Query: 652 EM 653
           E+
Sbjct: 637 EI 638