Pairwise Alignments

Query, 192 a.a., Holliday junction DNA helicase RuvA from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 203 a.a., Holliday junction branch migration protein RuvA from Pseudomonas fluorescens SBW25

 Score =  178 bits (452), Expect = 5e-50
 Identities = 95/202 (47%), Positives = 140/202 (69%), Gaps = 12/202 (5%)

Query: 1   MIGKLTGTLLEKNPPQILLDCHGVGYEVDVPMSTFYNLPAAGEKVALLTHFVVREDAQIL 60
           MIG+L GTL EK PP ++LD +G+GYE++VPM+T Y LP+ GE + L TH VVREDAQ+L
Sbjct: 1   MIGRLRGTLAEKQPPHLILDVNGLGYELEVPMTTLYRLPSVGEPITLHTHLVVREDAQLL 60

Query: 61  YGFGTAPEREAFRQLIKISGVGPRTALSVLSGMSVADLAQAVSAQESGRIVKVPGIGKKT 120
           YGF    +R+ FR+LI+++GVGP+ AL+++S + V +L +AVSAQ++  + KVPG+GKKT
Sbjct: 61  YGFIGKRDRDFFRELIRLNGVGPKLALALMSSLEVDELVRAVSAQDTSALTKVPGVGKKT 120

Query: 121 AERLLLELKGKLGADLNLP---GAGPAQSDV--------QSDIQQALMALGYSDKDATAA 169
           AERLL+ELK +  A   +P      P Q D+        +SD   AL++LGY  ++A+ A
Sbjct: 121 AERLLVELKDRFKAWEVVPSMFALVPNQPDMPAGQVASAESDAVSALISLGYKPQEASKA 180

Query: 170 LKAL-PKDVGVSEGIKLALKAL 190
           + A+  K++   + I+ ALK +
Sbjct: 181 VSAIKDKNLSSEDMIRRALKGM 202